RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 RNF13O43567 381 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 NUDT21O43809 227 aaKnown RBP8.54□□□□□ -1.04
UBE3B-207ENST00000537063 SBK2P0C263 348 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 PAICSP22234 425 aaKnown RBP8.54□□□□□ -1.04
UBE3B-207ENST00000537063 PPICP45877 212 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 SEPHS1P49903 392 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 CFHR1Q03591 330 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF85Q03923 595 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 MXD1Q05195 221 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 POU4F2Q12837 409 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 SKP2Q13309 424 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 CRMP1Q14194 572 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 D2HGDHQ8N465 521 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF614Q8N883 585 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 CLDN23Q96B33 292 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 TMCO6Q96DC7 493 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 SYNDIG1Q9H7V2 258 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 ABCB9Q9NP78 766 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 MUTYHQ9UIF7 546 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 KLHL21Q9UJP4 597 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 FRG2CA6NGY1 282 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 C17orf105B2RV13 164 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 PPM1BO75688 479 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 CSTAP01040 98 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 CFL1P23528 166 aaKnown RBP8.54□□□□□ -1.04
UBE3B-207ENST00000537063 LCN1P31025 176 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 RFX3P48380 749 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 DEFA1P59665 94 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 DEFA3P59666 94 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 HSD11B2P80365 405 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 CRYZQ08257 329 aaKnown RBP8.54□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.54□□□□□ -1.04
UBE3B-207ENST00000537063 NKAIN2Q5VXU1 208 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 XKRXQ6PP77 449 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 PRSS42Q7Z5A4 293 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 KLBQ86Z14 1044 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 METTL27Q8N6F8 245 aaPredicted RBP8.54□□□□□ -1.04
UBE3B-207ENST00000537063 C7orf57Q8NEG2 295 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 OR51A7Q8NH64 312 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 OR4C6Q8NH72 309 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 SGTBQ96EQ0 304 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 SLC41A2Q96JW4 573 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 SLC46A1Q96NT5 459 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF229Q9UJW7 825 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 GTPBP1O00178 669 aaKnown RBP8.54□□□□□ -1.04
UBE3B-207ENST00000537063 PLPP2O43688 288 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 SC5DO75845 299 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 RGS9O75916 674 aaPredicted RBP8.54□□□□□ -1.04
UBE3B-207ENST00000537063 NDUFB2O95178 105 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 DDAH2O95865 285 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 GIMD1P0DJR0 217 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 CELP19835 753 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 PGDP52209 483 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 EFNA3P52797 238 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 ACTC1P68032 377 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 ACTA1P68133 377 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 RIN1Q13671 783 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 NDUFAF6Q330K2 333 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 DDI2Q5TDH0 399 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 NUP54Q7Z3B4 507 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 ADIPOR1Q96A54 375 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 SHDQ96IW2 340 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 ATF6BQ99941 703 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 MKKSQ9NPJ1 570 aaPredicted RBP8.54□□□□□ -1.04
UBE3B-207ENST00000537063 PCDHGB2Q9Y5G2 931 aa8.54□□□□□ -1.04
UBE3B-207ENST00000537063 HEATR5AQ86XA9 2040 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 A0A1W2PQL4 384 aaPredicted RBP8.53□□□□□ -1.04
UBE3B-207ENST00000537063 RHPN2P1A8MT19 583 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 POLR1CO15160 346 aaPredicted RBP8.53□□□□□ -1.04
UBE3B-207ENST00000537063 OR7A10O76100 309 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 IFNGP01579 166 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 PTBP1P26599 531 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBE3B-207ENST00000537063 MTNR1BP49286 362 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 PPP3R1P63098 170 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 KCNAB1Q14722 419 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 ZMAT1Q5H9K5 638 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 B3GLCTQ6Y288 498 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 ATG4DQ86TL0 474 aaPredicted RBP8.53□□□□□ -1.04
UBE3B-207ENST00000537063 GPALPP1Q8IXQ4 340 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 ZNF721Q8TF20 911 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 SENP5Q96HI0 755 aaPredicted RBP8.53□□□□□ -1.04
UBE3B-207ENST00000537063 LMF1Q96S06 567 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 TMEM43Q9BTV4 400 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 TMED9Q9BVK6 235 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 NMNAT2Q9BZQ4 307 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 RNF32Q9H0A6 362 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 TPK1Q9H3S4 243 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 ERVMER34-1Q9H9K5 563 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 TRIM36Q9NQ86 728 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 UBQLN4Q9NRR5 601 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 RPS6KB2Q9UBS0 482 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 OR10H1Q9Y4A9 318 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 TCRBV16S1A1N1A0A5B0 115 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 DAPL1A0PJW8 107 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 ARPC3O15145 178 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 HLA-DQB1P01920 261 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 BCKDHBP21953 392 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 CSF2RBP32927 897 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 ATP6V1E1P36543 226 aa8.53□□□□□ -1.04
UBE3B-207ENST00000537063 TAS2R43P59537 309 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms