RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ZNF836Q6ZNA1 936 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 CBWD2Q8IUF1 395 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 ELMOD2Q8IZ81 293 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 OR51G1Q8NGK1 321 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 SAMD8Q96LT4 415 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 GAL3ST1Q99999 423 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 RASL11BQ9BPW5 248 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 DHX33Q9H6R0 707 aaKnown RBP2.35□□□□□ -2.03
CCDC7-208ENST00000537047 SOHLH2Q9NX45 425 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 AIPL1Q9NZN9 384 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 WRAP73Q9P2S5 460 aaPredicted RBP2.35□□□□□ -2.03
CCDC7-208ENST00000537047 MTRF1LQ9UGC7 380 aaKnown RBP2.35□□□□□ -2.03
CCDC7-208ENST00000537047 WARS2Q9UGM6 360 aaKnown RBP2.35□□□□□ -2.03
CCDC7-208ENST00000537047 TBX21Q9UL17 535 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 MAD1L1Q9Y6D9 718 aa2.35□□□□□ -2.03
CCDC7-208ENST00000537047 CUX2O14529 1486 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 E7ESA3 106 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 KIF2AO00139 706 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-208ENST00000537047 VPS26AO75436 327 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 KIAA0754O94854 1291 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 P04436 131 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 GIPP09681 153 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-208ENST00000537047 ADRB3P13945 408 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 PSMA2P25787 234 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 ANXA13P27216 316 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 PTGFRP43088 359 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 MNAT1P51948 309 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 MTTPP55157 894 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 YBEYP58557 167 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-208ENST00000537047 SELENOTP62341 195 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 OR52W1Q6IF63 320 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 LRRC8BQ6P9F7 803 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 FAM199XQ6PEV8 388 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-208ENST00000537047 TICAM2Q86XR7 235 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 SLC22A8Q8TCC7 542 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 PNPT1Q8TCS8 783 aaKnown RBP2.34□□□□□ -2.03
CCDC7-208ENST00000537047 TCTEX1D2Q8WW35 142 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 CCDC47Q96A33 483 aaKnown RBP2.34□□□□□ -2.03
CCDC7-208ENST00000537047 RAB7BQ96AH8 199 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 PGLYRP4Q96LB8 373 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 FOPNLQ96NB1 174 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 SPATA16Q9BXB7 569 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 NAT10Q9H0A0 1025 aaKnown RBP2.34□□□□□ -2.03
CCDC7-208ENST00000537047 ANGPTL2Q9UKU9 493 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 ERVW-1Q9UQF0 538 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 TP53TG5Q9Y2B4 290 aa2.34□□□□□ -2.03
CCDC7-208ENST00000537047 KIR2DS1A0A191URI9 304 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 GNA14O95837 355 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 PCCBP05166 539 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 PLEKP08567 350 aaPredicted RBP2.33□□□□□ -2.04
CCDC7-208ENST00000537047 STMN1P16949 149 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 ARF4P18085 180 aaPredicted RBP2.33□□□□□ -2.04
CCDC7-208ENST00000537047 ADSSP30520 456 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 RAB40BQ12829 278 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 SPP2Q13103 211 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 CUL1Q13616 776 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 KIR2DS1Q14954 304 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 ATL3Q6DD88 541 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 CCDC137Q6PK04 289 aaKnown RBP2.33□□□□□ -2.04
CCDC7-208ENST00000537047 LINC01561Q8N1V8 128 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 PNKDQ8N490 385 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 ZNF615Q8N8J6 731 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 RAPGEF5Q92565 580 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 MYLPFQ96A32 169 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 NRIP2Q9BQI9 281 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 PELOQ9BRX2 385 aaKnown RBP2.33□□□□□ -2.04
CCDC7-208ENST00000537047 FICDQ9BVA6 458 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 AGPAT5Q9NUQ2 364 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 B3GNT2Q9NY97 397 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 ATXN10Q9UBB4 475 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 CHMP2BQ9UQN3 213 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 NEUROG3Q9Y4Z2 214 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 ALG6Q9Y672 507 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 CARMIL1Q5VZK9 1371 aa2.33□□□□□ -2.04
CCDC7-208ENST00000537047 GFYI3L273 518 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 PES1O00541 588 aaKnown RBP2.32□□□□□ -2.04
CCDC7-208ENST00000537047 MT-ND3P03897 115 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 PNMA6AP0CW24 399 aaPredicted RBP2.32□□□□□ -2.04
CCDC7-208ENST00000537047 TNNI3P19429 210 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 CD80P33681 288 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 TAS2R19P59542 299 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 GMFBP60983 142 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 TIGITQ495A1 244 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 PARP10Q53GL7 1025 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 FAM71E1Q6IPT2 247 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 RAB12Q6IQ22 244 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 NIPAL3Q6P499 406 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 C6orf89Q6UWU4 347 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 ERASQ7Z444 233 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 LHFPL4Q7Z7J7 247 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 HDDC3Q8N4P3 179 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 ZNF709Q8N972 641 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 OR51G2Q8NGK0 314 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 OR52B4Q8NGK2 314 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 OR6X1Q8NH79 312 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 PAQR8Q8TEZ7 354 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 RPUSD4Q96CM3 377 aaKnown RBP2.32□□□□□ -2.04
CCDC7-208ENST00000537047 OR2M2Q96R28 347 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 KCNA7Q96RP8 456 aa2.32□□□□□ -2.04
CCDC7-208ENST00000537047 SCN2AQ99250 2005 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms