RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 MS4A4EQ96PG1 132 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SPSB2Q99619 263 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 NDEL1Q9GZM8 345 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PNO1Q9NRX1 252 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ERVK-19Q9WJR5 959 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 IGLV3-12A0A075B6K2 115 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CCDC187A0A096LP49 1063 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TCRBV16S1A1N1A0A5B0 115 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 A6NL46 340 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 KDM4EB2RXH2 506 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 IDSB3KWA1 339 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PRKNO60260 465 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ALPPP05187 535 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 S1PR1P21453 382 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 LSM11P83369 360 aaKnown RBP eCLIP11.92□□□□□ -0.53e-9■■□□□ 12.5
CDK5RAP3-202ENST00000536708 ST3GAL3Q11203 375 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ZNF267Q14586 743 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 NSDHLQ15738 373 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SNAPC1Q16533 368 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ZNF311Q5JNZ3 666 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 MFSD12Q6NUT3 480 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ZNF544Q6NX49 715 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SLC27A4Q6P1M0 643 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PRICKLE2Q7Z3G6 844 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 HMGN2P46Q86SG4 172 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SLC16A11Q8NCK7 471 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TOR1AIP2Q8NFQ8 470 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 MR1Q95460 341 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CEP19Q96LK0 163 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 KCNS3Q9BQ31 491 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 MED18Q9BUE0 208 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ACTRT3Q9BYD9 372 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 EXOSC4Q9NPD3 245 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CHST2Q9Y4C5 530 aa11.92□□□□□ -0.5
CDK5RAP3-202ENST00000536708 BLACEA4D250 179 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 DUXAA6NLW8 204 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 C17orf105B2RV13 164 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SSX4O60224 188 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CLPSP04118 112 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 STAT5AP42229 794 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 OMPP47874 163 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ETV1P50549 477 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 WNT4P56705 351 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TAS2R41P59536 307 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CHRNEQ04844 493 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TPBGQ13641 420 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 NNATQ16517 81 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TMEM44Q2T9K0 475 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ATAD3CQ5T2N8 411 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PAQR6Q6TCH4 344 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 VASH1Q7L8A9 365 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 OVCH1Q7RTY7 1134 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TIPARPQ7Z3E1 657 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 BPHLQ86WA6 291 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CLDN22Q8N7P3 220 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 OR52R1Q8NGF1 315 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TEX47Q8TBZ9 253 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PTPMT1Q8WUK0 201 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ASB15Q8WXK1 588 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 RBM18Q96H35 190 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PRRG3Q9BZD7 231 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SAP130Q9H0E3 1048 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 C19orf53Q9UNZ5 99 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 EXOSC1Q9Y3B2 195 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SF3B6Q9Y3B4 125 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 MMACHCQ9Y4U1 282 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CEP295Q9C0D2 2601 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PCSK5Q92824 1860 aa11.91□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PLOD3O60568 738 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 AGR2O95994 175 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 GAAP10253 952 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 IFNA8P32881 189 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 OR2B6P58173 313 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PSPHP78330 225 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 ZNF155Q12901 538 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 DECR1Q16698 335 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 MRPL14Q6P1L8 145 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 UBQLNLQ8IYU4 475 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 OR6F1Q8NGZ6 308 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SLC9A6Q92581 669 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CDS1Q92903 461 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 SLC25A46Q96AG3 418 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 C8orf44Q96CB5 159 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PLA2G12AQ9BZM1 189 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TGIF2Q9GZN2 237 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TRIM45Q9H8W5 580 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 TXNL4BQ9NX01 149 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 PTGFRNQ9P2B2 879 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 EXPH5Q8NEV8 1989 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 FRYQ5TBA9 3013 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 A0A087WV62 115 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 KLF4O43474 513 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 GFRA3O60609 400 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 MYL12AP19105 171 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 CSRP1P21291 193 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 FPR3P25089 353 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 RPS18P62269 152 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 LARS2Q15031 903 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 DUSP5Q16690 384 aa11.9□□□□□ -0.5
CDK5RAP3-202ENST00000536708 FLYWCH1Q4VC44 716 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms