RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 PTGR1Q14914 329 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 QPRTQ15274 297 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 CHRFAM7AQ494W8 412 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 SYT14P1Q58G82 188 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 C6orf52Q5T4I8 152 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 HMBOX1Q6NT76 420 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 ATG4DQ86TL0 474 aaPredicted RBP9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 LRRN4CLQ8ND94 238 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 OR7A2PQ8NGA2 310 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 NEUROG1Q92886 237 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 RHNO1Q9BSD3 238 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 ALG2Q9H553 416 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 ANKZF1Q9H8Y5 726 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 SERINC1Q9NRX5 453 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 TAS2R16Q9NYV7 291 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 LPAR3Q9UBY5 353 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 DCTN4Q9UJW0 460 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 SLC35A3Q9Y2D2 325 aa9.88□□□□□ -0.83
CLSTN3-206ENST00000535668 E7EQL1 145 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 GTPBP1O00178 669 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 PIP5K1BO14986 540 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 ZNF208O43345 1280 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 KIAA0513O60268 411 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 NDUFS7O75251 213 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 PGCP20142 388 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 CD40P25942 277 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 NTF4P34130 210 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 CDKN1AP38936 164 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 EMX2Q04743 252 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 MAD2L1Q13257 205 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 TMEM249Q2WGJ8 235 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 ATP6AP1LQ52LC2 224 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 EIF3MQ7L2H7 374 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 PHC2Q8IXK0 858 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 RIBC1Q8N443 379 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 FBXO30Q8TB52 745 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 JADE3Q92613 823 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 ADAD1Q96M93 576 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 HS6ST2Q96MM7 605 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 ZNF317Q96PQ6 595 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 OR7D2Q96RA2 312 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 SERHL2Q9H4I8 314 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 LGALS13Q9UHV8 139 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 PRSS50Q9UI38 385 aa9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 SPIN1Q9Y657 262 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-206ENST00000535668 IGHV4-30-2A0A087WSY4 118 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 VWC2LB2RUY7 222 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 NDUFS8O00217 210 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 ABCD4O14678 606 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 RRP9O43818 475 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 GMFGO60234 142 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 FCMRO60667 390 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 EIF1BO60739 113 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 LYZL6O75951 148 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 SNUPNO95149 360 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 SHBGP04278 402 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 CHRNGP07510 517 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 NUDT17P0C025 328 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 DHRS4L1P0CG22 281 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 ARRB2P32121 409 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 MAGEA8P43361 318 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 HTR3AP46098 478 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 CDH11P55287 796 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 IRX1P78414 480 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 TP53BP2Q13625 1128 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 TSC22D1Q15714 1073 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 GABRA6Q16445 453 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 C3orf36Q3SXR2 165 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 PDZK1Q5T2W1 519 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 PPP4R4Q6NUP7 873 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 KLHL17Q6TDP4 642 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 GRINAQ7Z429 371 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 ADGRG3Q86Y34 549 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 CMIPQ8IY22 773 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 MUC15Q8N387 334 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 FAM169BQ8N8A8 192 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 CLHC1Q8NHS4 586 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 PIGXQ8TBF5 258 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 NANOS1Q8WY41 292 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 TMEM45BQ96B21 275 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 TESCQ96BS2 214 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 APOPT1Q96IL0 206 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 C3orf30Q96M34 536 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 ZNF300Q96RE9 604 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 INPP5KQ9BT40 448 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 DUSP26Q9BV47 211 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 OBP2BQ9NPH6 170 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 PARPBPQ9NWS1 579 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 ASB6Q9NWX5 421 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 CHRNA9Q9UGM1 479 aa9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 GDF2Q9UK05 429 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-206ENST00000535668 PRSS51A0A1B0GVH4 220 aa9.85□□□□□ -0.83
CLSTN3-206ENST00000535668 A0A1W2PNR3 127 aa9.85□□□□□ -0.83
CLSTN3-206ENST00000535668 SULT2B1O00204 365 aa9.85□□□□□ -0.83
CLSTN3-206ENST00000535668 FZD7O75084 574 aa9.85□□□□□ -0.83
CLSTN3-206ENST00000535668 NUDT14O95848 222 aa9.85□□□□□ -0.83
CLSTN3-206ENST00000535668 C6orf47O95873 294 aa9.85□□□□□ -0.83
CLSTN3-206ENST00000535668 CSTAP01040 98 aa9.85□□□□□ -0.83
CLSTN3-206ENST00000535668 BMP4P12644 408 aa9.85□□□□□ -0.83
CLSTN3-206ENST00000535668 ALDH3A1P30838 453 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms