RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ATP10DQ9P241 1426 aa3.15□□□□□ -1.91
PRKDC-205ENST00000535375 TRBV6-6A0A0A6YYG2 114 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 MBLAC1A4D2B0 266 aaPredicted RBP3.14□□□□□ -1.91
PRKDC-205ENST00000535375 OR6C65A6NJZ3 312 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 GPR89AB7ZAQ6 455 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 MAGEB3O15480 346 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 B3GAT3O94766 335 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 IGF1P05019 195 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 IGHV4-34P06331 123 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 GPR89BP0CG08 455 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 PSMA2P25787 234 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 PPT1P50897 306 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 GBX2P52951 348 aaPredicted RBP3.14□□□□□ -1.91
PRKDC-205ENST00000535375 APOC4P55056 127 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 SELPLGQ14242 412 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 TATDN3Q17R31 274 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 RABGAP1LQ5R372 815 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 LANCL3Q6ZV70 420 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 ARCQ7LC44 396 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 NRMQ8IXM6 262 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 ZNF740Q8NDX6 193 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 RLN3Q8WXF3 142 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 OR1E3Q8WZA6 343 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 RDH5Q92781 318 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 MYDGFQ969H8 173 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 MS4A14Q96JA4 679 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 AKR1E2Q96JD6 320 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 MBOAT4Q96T53 435 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 ARHGDIGQ99819 225 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 PRPF19Q9UMS4 504 aaKnown RBP3.14□□□□□ -1.91
PRKDC-205ENST00000535375 WSB1Q9Y6I7 421 aa3.14□□□□□ -1.91
PRKDC-205ENST00000535375 IGKV2D-24A0A075B6R9 120 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 LOC100131303A0A0U1RQF7 123 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 CLRN2A0PK11 232 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 GSAPA4D1B5 854 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 FAM74A7A6NL05 159 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 A8MUI8 341 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 K7EQM0 130 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 K7N7A8 449 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 FCN1O00602 326 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 CXCL11O14625 94 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 OR1F1O43749 312 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 BCAS1O75363 584 aaPredicted RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 KLF8O95600 359 aaPredicted RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 RPA2P15927 270 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 TBXA2RP21731 343 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 GLRA2P23416 452 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 CCNCP24863 283 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 AQP1P29972 269 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 NUDT1P36639 197 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 RPS10P46783 165 aaKnown RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 RGS4P49798 205 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 ACTR1AP61163 376 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 CSTF1Q05048 431 aaKnown RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 ARFRP1Q13795 201 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 KCTD19Q17RG1 926 aaPredicted RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 CCDC57Q2TAC2 916 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 FAM74A3Q4VXF1 159 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 CASC1Q6TDU7 716 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 KDELC1Q6UW63 502 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 FAM220AQ7Z4H9 259 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 SUMF2Q8NBJ7 301 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 BLOC1S5Q8TDH9 187 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 FAM3CQ92520 227 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 SENP8Q96LD8 212 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 ZNF607Q96SK3 696 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 SRXN1Q9BYN0 137 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 CRNKL1Q9BZJ0 848 aaKnown RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 POLR2J2Q9GZM3 115 aaKnown RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 POLR2J3Q9H1A7 115 aaKnown RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 NXF3Q9H4D5 531 aaKnown RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 RHOJQ9H4E5 214 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 GORASP2Q9H8Y8 452 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 MMP26Q9NRE1 261 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 SMPD3Q9NY59 655 aaPredicted RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 XPO7Q9UIA9 1087 aaKnown RBP3.13□□□□□ -1.91
PRKDC-205ENST00000535375 BTNL2Q9UIR0 455 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 ANAPC7Q9UJX3 599 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 USP16Q9Y5T5 823 aa3.13□□□□□ -1.91
PRKDC-205ENST00000535375 A8MUA0 341 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 GMFGO60234 142 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 TM7SF2O76062 418 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 INSP01308 110 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 PDHBP11177 359 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 ATP6V1C1P21283 382 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 CHI3L1P36222 383 aaPredicted RBP3.12□□□□□ -1.91
PRKDC-205ENST00000535375 CTRLP40313 264 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 LINC00315P59091 139 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 UBE2HP62256 183 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 IL24Q13007 206 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 ATXN7L3Q14CW9 347 aaPredicted RBP3.12□□□□□ -1.91
PRKDC-205ENST00000535375 NSDHLQ15738 373 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 CHI3L2Q15782 390 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 CCDC152Q4G0S7 254 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 CFAP157Q5JU67 520 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 ATF7IP2Q5U623 682 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 RGS9BPQ6ZS82 235 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 RNF165Q6ZSG1 346 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 DPY19L4Q7Z388 723 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms