RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ESRRGP62508 458 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 RAP1AP62834 184 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 HERVK_113P63132 956 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ERVK-8P63133 956 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 MRPS6P82932 125 aaKnown RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 SYCNQ0VAF6 134 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CDC20Q12834 499 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ZP4Q12836 540 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 BTG3Q14201 252 aaPredicted RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 SLMAPQ14BN4 828 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ACSF3Q4G176 576 aaPredicted RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 SLC39A12Q504Y0 691 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 C1orf100Q5SVJ3 147 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 LIPNQ5VXI9 398 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CTRB2Q6GPI1 263 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 C11orf71Q6IPW1 123 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 RPUSD3Q6P087 351 aaKnown RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 MORN3Q6PF18 240 aaPredicted RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 TMIGD1Q6UXZ0 262 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 SPNS3Q6ZMD2 512 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 FAM92BQ6ZTR7 304 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 C1orf186Q6ZWK4 172 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 P4HA3Q7Z4N8 544 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 WDR86Q86TI4 376 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 AMZ2Q86W34 360 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CCDC83Q8IWF9 413 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CCDC36Q8IYA8 594 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 EXOC8Q8IYI6 725 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ZNF679Q8IYX0 411 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 LRRC52Q8N7C0 313 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ZSCAN4Q8NAM6 433 aaPredicted RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 ZNF680Q8NEM1 530 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ARPC1AQ92747 370 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 TMEM45BQ96B21 275 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 TM4SF19Q96DZ7 209 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ELMO2Q96JJ3 720 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 GBP5Q96PP8 586 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CYP2S1Q96SQ9 504 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 HIST1H4GQ99525 98 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CITED1Q99966 193 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 GAL3ST1Q99999 423 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ZNF649Q9BS31 505 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 TIMM29Q9BSF4 260 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 SHANK2-AS3Q9BTD1 123 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 TMEM121Q9BTD3 319 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ERVK-6Q9BXR3 956 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 TXLNGYQ9BZA5 131 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 OR10A4Q9H209 315 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 RPP21Q9H633 154 aaKnown RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 TMEM206Q9H813 350 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ZFP14Q9HCL3 533 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 PARP11Q9NR21 331 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 CCL28Q9NRJ3 127 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 B3GNT2Q9NY97 397 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 SEPT10Q9P0V9 454 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 NARFQ9UHQ1 456 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 ANAPC5Q9UJX4 755 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 EIF3LQ9Y262 564 aaKnown RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 USP16Q9Y5T5 823 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 V9GY05 133 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 MN1Q10571 1320 aaPredicted RBP0.04□□□□□ -2.4
COPB1-212ENST00000534771 SDK2Q58EX2 2172 aa0.04□□□□□ -2.4
COPB1-212ENST00000534771 VWDEQ8N2E2 1590 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 FBN2P35556 2912 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 IGKV1D-43A0A0B4J1Z2 117 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 TRAV34A0A0B4J273 112 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 IGHV3-66A0A0C4DH42 116 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 TTC26A0AVF1 554 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 PRSS37A4D1T9 235 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 FBLL1A6NHQ2 334 aaKnown RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 A6NIZ1 184 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 SPECC1L-ADORA2AF8WAN1 911 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 FCN1O00602 326 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 PEX7O00628 323 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 P4HA2O15460 535 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 TTI1O43156 1089 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 NME2P1O60361 137 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 TBX19O60806 448 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 CENPBP07199 599 aaPredicted RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 H2AFXP16104 143 aaPredicted RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 ATP5A1P25705 553 aaKnown RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 FMO3P31513 532 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 KLK7P49862 253 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 SERPINH1P50454 418 aaKnown RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 PRRX1P54821 245 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 RAP1BP61224 184 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 PRB3Q04118 309 aaPredicted RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 ZNF763Q0D2J5 394 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 PLD1Q13393 1074 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 TFDP1Q14186 410 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 SIM2Q14190 667 aaPredicted RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 PIGHQ14442 188 aaPredicted RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 IHHQ14623 411 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 ARL6IP1Q15041 203 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 MAPRE1Q15691 268 aaKnown RBP0.03□□□□□ -2.4
COPB1-212ENST00000534771 PARP10Q53GL7 1025 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 LRRC10Q5BKY1 277 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 CCDC158Q5M9N0 1113 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 GORABQ5T7V8 394 aa0.03□□□□□ -2.4
COPB1-212ENST00000534771 SCYL2Q6P3W7 929 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms