RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	GPSM1	Q86YR5	675 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	RNF175	Q8N4F7	328 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	FADS6	Q8N9I5	356 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	RAB3IL1	Q8TBN0	382 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	SMAP2	Q8WU79	429 aa	Predicted RBP	5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	UBTD2	Q8WUN7	234 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	MAGOHB	Q96A72	148 aa	Known RBP	5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	TMCO6	Q96DC7	493 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	LRRC39	Q96DD0	335 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	COL21A1	Q96P44	957 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	BTBD9	Q96Q07	612 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	TNFRSF13C	Q96RJ3	184 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	PINK1	Q9BXM7	581 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	BEX2	Q9BXY8	128 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	RHOJ	Q9H4E5	214 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	ZBTB26	Q9HCK0	441 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	MAT2B	Q9NZL9	334 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	DKKL1	Q9UK85	242 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	LIPT1	Q9Y234	373 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	GPR52	Q9Y2T5	361 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	RNF115	Q9Y4L5	304 aa		5.36	□□□□□ -1.55
PICALM-223	ENST00000534412	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	5.36	□□□□□ -1.55	3e-7	■■■■□ 23.4
PICALM-223	ENST00000534412	MED12L	Q86YW9	2145 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	NIN	Q8N4C6	2090 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	EXPH5	Q8NEV8	1989 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412		K7EPI3	171 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	DNALI1	O14645	258 aa	Predicted RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	RGS10	O43665	173 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	TSPAN2	O60636	221 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	AQP8	O94778	261 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	SEMA3D	O95025	777 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	CD8A	P01732	235 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	POR	P16435	677 aa	Predicted RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	PTMS	P20962	102 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	NT5E	P21589	574 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	PIK3R1	P27986	724 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	DEK	P35659	375 aa	Known RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	ELK3	P41970	407 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	PPIC	P45877	212 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	FNTA	P49354	379 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	EMD	P50402	254 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	XK	P51811	444 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	ARFIP2	P53365	341 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	CLDN20	P56880	219 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	DSCR9	P59020	149 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	DDX39B	Q13838	428 aa	Known RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	GANAB	Q14697	944 aa	Known RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	ZKSCAN8	Q15776	578 aa	Predicted RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	EXOC3L2	Q2M3D2	409 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	ZNF672	Q499Z4	452 aa	Predicted RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	RNASE12	Q5GAN4	147 aa	Known RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	NCMAP	Q5T1S8	102 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	C6orf163	Q5TEZ5	329 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	RAET1L	Q5VY80	246 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	SLC48A1	Q6P1K1	146 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	CYP20A1	Q6UW02	462 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	ZNF813	Q6ZN06	617 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	MEX3D	Q86XN8	651 aa	Known RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	UBQLNL	Q8IYU4	475 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	SPATA6L	Q8N4H0	392 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	NANOGP1	Q8N7R0	232 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	TRIM58	Q8NG06	486 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	OR4K14	Q8NGD5	310 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	TMBIM1	Q969X1	311 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	GMPPA	Q96IJ6	420 aa	Predicted RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	UBXN10	Q96LJ8	280 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	HS6ST2	Q96MM7	605 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	MTERF1	Q99551	399 aa	Known RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	TRAF4	Q9BUZ4	470 aa	Predicted RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	TRIM2	Q9C040	744 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	SHARPIN	Q9H0F6	387 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	ESRP2	Q9H6T0	727 aa	Known RBP	5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	SAYSD1	Q9NPB0	183 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	FANCF	Q9NPI8	374 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	NUDT4	Q9NZJ9	180 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	CD274	Q9NZQ7	290 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	ASIC3	Q9UHC3	531 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	CES1P1	Q9UKY3	287 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	CORO2B	Q9UQ03	480 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	CHMP2B	Q9UQN3	213 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	PLLP	Q9Y342	182 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	ZNF337	Q9Y3M9	751 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	TEX264	Q9Y6I9	313 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412	FREM3	P0C091	2139 aa		5.35	□□□□□ -1.55
PICALM-223	ENST00000534412		A0A1W2PP18	115 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	OR2M5	A3KFT3	312 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	GOLGA6L10	A6NI86	522 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	C17orf51	A8MQB3	221 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	FOXE1	O00358	373 aa	Predicted RBP	5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	CLOCK	O15516	846 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	SEC14L5	O43304	696 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	UGDH	O60701	494 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	GCM2	O75603	506 aa	Predicted RBP	5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	GBA	P04062	536 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	CCDC166	P0CW27	439 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	CT45A8	P0DMV1	189 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	CT45A9	P0DMV2	189 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	SLC25A16	P16260	332 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	SRD5A1	P18405	259 aa		5.34	□□□□□ -1.55
PICALM-223	ENST00000534412	IGFBP5	P24593	272 aa		5.34	□□□□□ -1.55

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