RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897		A0A0B4J203	849 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ANKRD20A5P	A0PJZ0	165 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897		B8ZZF3	427 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	KPNA3	O00505	521 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	PEX12	O00623	359 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ADAM10	O14672	748 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	MID1	O15344	667 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	PLRG1	O43660	514 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	NKX2-2	O95096	273 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	MELTF	P08582	738 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CSNK2A2	P19784	350 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	CXCL2	P19875	107 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	NTS	P30990	170 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	RAB25	P57735	213 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	NANOS3	P60323	173 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	IGLV3-21	P80748	117 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	MRPS15	P82914	257 aa	Known RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	PRR5	P85299	388 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	RPL13AP3	Q6NVV1	102 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	NUDT18	Q6ZVK8	323 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	KCT2	Q8NC54	265 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OR51G2	Q8NGK0	314 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OR13C2	Q8NGS9	318 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	FANK1	Q8TC84	345 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	UBASH3B	Q8TF42	649 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SMAP2	Q8WU79	429 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	TMEM239	Q8WW34	195 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	C4orf36	Q96KX1	117 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	RAB11FIP5	Q9BXF6	653 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	DPH1	Q9BZG8	443 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	KCNN2	Q9H2S1	579 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OR51J1	Q9H342	316 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	C1orf198	Q9H425	327 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	XKR8	Q9H6D3	395 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OBP2A	Q9NY56	170 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	COPZ2	Q9P299	210 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	DAPP1	Q9UN19	280 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SCML1	Q9UN30	329 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	NCKAP1	Q9Y2A7	1128 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	SLC35A3	Q9Y2D2	325 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	OR1A2	Q9Y585	309 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	ENTPD2	Q9Y5L3	495 aa		4.07	□□□□□ -1.76
CTSC-208	ENST00000533897	THADA	Q6YHU6	1953 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	IGKV1D-42	A0A075B6H8	117 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	TRBV5-7	A0A0A0MS05	114 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	FAM240B	A0A1B0GVZ2	78 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897		A8MXK9	166 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	BTN3A3	O00478	584 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	CDK2AP1	O14519	115 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	SLC9A3R1	O14745	358 aa	Predicted RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	ERI3	O43414	337 aa	Known RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	UPK3A	O75631	287 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	CBX7	O95931	251 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	C8orf89	P0DMQ9	161 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	ZNF250	P15622	560 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	ADRA2C	P18825	462 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	MPI	P34949	423 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	SSR2	P43308	183 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	SOX9	P48436	509 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	EXOSC2	Q13868	293 aa	Known RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	FAM53B	Q14153	422 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	AANAT	Q16613	207 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	NTRK2	Q16620	822 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	SPDYE7P	Q495Y7	208 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	TRMT12	Q53H54	448 aa	Known RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	MRPL2	Q5T653	305 aa	Known RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	TRIQK	Q629K1	86 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	ZCCHC12	Q6PEW1	402 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	RNF44	Q7L0R7	432 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	SLC51B	Q86UW2	128 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	ZPLD1	Q8TCW7	415 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	KAT2A	Q92830	837 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	GHSR	Q92847	366 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	SHARPIN	Q9H0F6	387 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	AUNIP	Q9H7T9	357 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	BARX1	Q9HBU1	254 aa	Predicted RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	LYRM4	Q9HD34	91 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	TRIM36	Q9NQ86	728 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	CA10	Q9NS85	328 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	MAT2B	Q9NZL9	334 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	NUP50	Q9UKX7	468 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	SLC6A5	Q9Y345	797 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	MRPS2	Q9Y399	296 aa	Known RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	FKBP7	Q9Y680	259 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	LAMA1	P25391	3075 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	TBC1D3E	A0A087X179	549 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897		A0A1B0GUH1	482 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	LINC00854	A0A1B0GVQ3	168 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	CIB4	A0PJX0	185 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	SLC22A31	A6NKX4	558 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	EIF4E2	O60573	245 aa	Known RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	AGR2	O95994	175 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	PROS1	P07225	676 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	CLTB	P09497	229 aa		4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	ZNF888	P0CJ79	500 aa	Predicted RBP	4.06	□□□□□ -1.76
CTSC-208	ENST00000533897	CPM	P14384	443 aa		4.06	□□□□□ -1.76

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