RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 C1QTNF2Q9BXJ5 285 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 CDHR4A6H8M9 788 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 FZD7O75084 574 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 PPP1R3DO95685 299 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 LAMP2P13473 410 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 IL9P15248 144 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 THBS2P35442 1172 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 MTNR1BP49286 362 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 EXOSC7Q15024 291 aaKnown RBP17.9■□□□□ 0.46
CAPN1-226ENST00000533820 OR1Q1Q15612 314 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 ZSWIM7Q19AV6 140 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 TMEM239Q8WW34 195 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 PIGKQ92643 395 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 KLHL15Q96M94 604 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF578Q96N58 590 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-226ENST00000533820 SDF2Q99470 211 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 TEAD3Q99594 435 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 NDC1Q9BTX1 674 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 PITHD1Q9GZP4 211 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-226ENST00000533820 CA5BQ9Y2D0 317 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 MT-ND4P03905 459 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 FOXK2Q01167 660 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 SGCGQ13326 291 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF273Q14593 569 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 CST6Q15828 149 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 PLA1AQ53H76 456 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 VN1R4Q7Z5H5 301 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 C9orf62Q8N4C0 152 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 ZNF655Q8N720 491 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-226ENST00000533820 OR14C36Q8NHC7 312 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 GHSRQ92847 366 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 MOAP1Q96BY2 351 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 PEX11GQ96HA9 241 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 TEX101Q9BY14 249 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 GSDMCQ9BYG8 508 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 CLDND1Q9NY35 253 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 ZMIZ1Q9ULJ6 1067 aa17.9■□□□□ 0.46
CAPN1-226ENST00000533820 CEACAM5P06731 702 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 CMPK1P30085 196 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 BTCP35070 178 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 NAA10P41227 235 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-226ENST00000533820 SCRN3Q0VDG4 424 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 RPE65Q16518 533 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 ACSM3Q53FZ2 586 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 OAFQ86UD1 273 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 OR11H4Q8NGC9 324 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 HDAC8Q9BY41 377 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 KCNE5Q9UJ90 142 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 TEX13CA0A0J9YWL9 993 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 PSMD9O00233 223 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 PLATP00750 562 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 MT-ND5P03915 603 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 AHCYP23526 432 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 LRFN4Q6PJG9 635 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 PM20D2Q8IYS1 436 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 OR10G6Q8NH81 332 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 KISS1RQ969F8 398 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-226ENST00000533820 BPIFA2Q96DR5 249 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 ZMYND19Q96E35 227 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-226ENST00000533820 LINC00052Q96N35 136 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 MS4A4EQ96PG1 132 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 ZNF416Q9BWM5 594 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 RANBP3Q9H6Z4 567 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-226ENST00000533820 RDH8Q9NYR8 311 aa17.89■□□□□ 0.45
CAPN1-226ENST00000533820 RAB19A4D1S5 217 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 RFPL3O75679 317 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 DHFRP00374 187 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 MYOGP15173 224 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 PER3P56645 1201 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 PRSS41Q7RTY9 318 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 RANBP3LQ86VV4 465 aaPredicted RBP17.88■□□□□ 0.45
CAPN1-226ENST00000533820 GID4Q8IVV7 300 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 SIAH3Q8IW03 269 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 TOMM5Q8N4H5 51 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 SGTBQ96EQ0 304 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 PTCHD1Q96NR3 888 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 MED17Q9NVC6 651 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 PCOLCE2Q9UKZ9 415 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 TRAPPC13A5PLN9 417 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 DUXAA6NLW8 204 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 J3QRE1 110 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 BHLHE40O14503 412 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 PEPDP12955 493 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 TMEM44Q2T9K0 475 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 BICRALQ6AI39 1079 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 TEX261Q6UWH6 196 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 CCL4L1Q8NHW4 92 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 HYLS1Q96M11 299 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 AK6Q9Y3D8 172 aaKnown RBP17.88■□□□□ 0.45
CAPN1-226ENST00000533820 U3KQ87 197 aa17.88■□□□□ 0.45
CAPN1-226ENST00000533820 CARNS1A5YM72 827 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 FAM86C2PA6NEL3 165 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 F8A1P23610 371 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 MAGEB1P43366 347 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 CAPZA2P47755 286 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 ACSM1Q08AH1 577 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 FGFBP1Q14512 234 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 ZAR1Q86SH2 424 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 OR4K14Q8NGD5 310 aa17.87■□□□□ 0.45
CAPN1-226ENST00000533820 ACOT12Q8WYK0 555 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms