RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TMEM120AQ9BXJ8 343 aa13.75□□□□□ -0.21
CPSF1-210ENST00000532935 OPN3Q9H1Y3 402 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-210ENST00000532935 A4GALTQ9NPC4 353 aa13.75□□□□□ -0.21
CPSF1-210ENST00000532935 SERINC1Q9NRX5 453 aa13.75□□□□□ -0.21
CPSF1-210ENST00000532935 FGFR1OP2Q9NVK5 253 aa13.75□□□□□ -0.21
CPSF1-210ENST00000532935 CLEC4AQ9UMR7 237 aa13.75□□□□□ -0.21
CPSF1-210ENST00000532935 EMC9Q9Y3B6 208 aa13.75□□□□□ -0.21
CPSF1-210ENST00000532935 GMEB1Q9Y692 573 aa13.75□□□□□ -0.21
CPSF1-210ENST00000532935 MYO9AB2RTY4 2548 aa13.75□□□□□ -0.21
CPSF1-210ENST00000532935 FREM1Q5H8C1 2179 aa13.75□□□□□ -0.21
CPSF1-210ENST00000532935 A0A1W2PNR3 127 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 CDHR4A6H8M9 788 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 TUBAL3A6NHL2 446 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 AP3D1O14617 1153 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 VIMP08670 466 aaKnown RBP13.74□□□□□ -0.21
CPSF1-210ENST00000532935 CD8BP10966 210 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 APOBEC1P41238 236 aaKnown RBP13.74□□□□□ -0.21
CPSF1-210ENST00000532935 IDH2P48735 452 aaKnown RBP13.74□□□□□ -0.21
CPSF1-210ENST00000532935 CTBP2P56545 445 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 GTF2IRD2BQ6EKJ0 949 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 ZNF474Q6S9Z5 364 aaPredicted RBP13.74□□□□□ -0.21
CPSF1-210ENST00000532935 DLEU7Q6UYE1 221 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 ZNF836Q6ZNA1 936 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 GRINAQ7Z429 371 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 GTF2IRD2Q86UP8 949 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 VRK2Q86Y07 508 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 OR6K3Q8NGY3 331 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 LINC01560Q8TB33 94 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 RNF128Q8TEB7 428 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 ROBO4Q8WZ75 1007 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 MAL2Q969L2 176 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 REXO5Q96IC2 774 aaKnown RBP13.74□□□□□ -0.21
CPSF1-210ENST00000532935 OR5B2Q96R09 309 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 CCT8L2Q96SF2 557 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 BCL2L10Q9HD36 194 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 CTPS2Q9NRF8 586 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 GLRX2Q9NS18 164 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.74□□□□□ -0.21
CPSF1-210ENST00000532935 LEF1Q9UJU2 399 aaPredicted RBP13.74□□□□□ -0.21
CPSF1-210ENST00000532935 PROCRQ9UNN8 238 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 ZNF443Q9Y2A4 671 aaPredicted RBP13.74□□□□□ -0.21
CPSF1-210ENST00000532935 OTOGQ6ZRI0 2925 aa13.74□□□□□ -0.21
CPSF1-210ENST00000532935 CFAP73A6NFT4 308 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 FAAHO00519 579 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 THBS1P07996 1170 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 PABPC4LP0CB38 370 aaKnown RBP13.73□□□□□ -0.21
CPSF1-210ENST00000532935 ARFIP2P53365 341 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 RAC3P60763 192 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 FAM27E3Q08E93 113 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 EPS8Q12929 822 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 LARS2Q15031 903 aaKnown RBP13.73□□□□□ -0.21
CPSF1-210ENST00000532935 SYT14P1Q58G82 188 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 GCNT6Q5T4J0 391 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 PRAMEF8Q5VWM4 474 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 PRAMEF7Q5VXH5 474 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 CGB2Q6NT52 195 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 TMEM200AQ86VY9 491 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 ZNF440Q8IYI8 595 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 C10orf111Q8N326 155 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 ZNF610Q8N9Z0 462 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 ABHD3Q8WU67 409 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 SLC25A43Q8WUT9 341 aaPredicted RBP13.73□□□□□ -0.21
CPSF1-210ENST00000532935 IKZF5Q9H5V7 419 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 CACYBPQ9HB71 228 aaKnown RBP13.73□□□□□ -0.21
CPSF1-210ENST00000532935 RLIMQ9NVW2 624 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 CHRNA9Q9UGM1 479 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 ZNF232Q9UNY5 417 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 CORO2BQ9UQ03 480 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 NDUFAF1Q9Y375 327 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 SPIN1Q9Y657 262 aaPredicted RBP13.73□□□□□ -0.21
CPSF1-210ENST00000532935 SPG11Q96JI7 2443 aa13.73□□□□□ -0.21
CPSF1-210ENST00000532935 EVPLLA8MZ36 301 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 C5orf58C9J3I9 102 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 NDUFAB1O14561 156 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 ANGPT2O15123 496 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 PGM3O95394 542 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 ARAFP10398 606 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 EPXP11678 715 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 UQCRBP14927 111 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 GPX2P18283 190 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 AGTR1P30556 359 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 CD79BP40259 229 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 HTR3AP46098 478 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 PCYT1AP49585 367 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 SF3A3Q12874 501 aaKnown RBP eCLIP13.72□□□□□ -0.21
CPSF1-210ENST00000532935 RNPS1Q15287 305 aaKnown RBP13.72□□□□□ -0.21
CPSF1-210ENST00000532935 ZSWIM7Q19AV6 140 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 RNF220Q5VTB9 566 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 FCRLAQ7L513 359 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 CPLX4Q7Z7G2 160 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 RETREG3Q86VR2 466 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 ADGRG3Q86Y34 549 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 CLIP4Q8N3C7 705 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 DPP10Q8N608 796 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 NFKBIDQ8NI38 313 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 BBS10Q8TAM1 723 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 TSPEARQ8WU66 669 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 CPPED1Q9BRF8 314 aaPredicted RBP13.72□□□□□ -0.21
CPSF1-210ENST00000532935 SLC39A3Q9BRY0 314 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms