RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 OR52I1Q8NGK6 324 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 FAM46BQ96A09 425 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 OR10A4Q9H209 315 aa14.25□□□□□ -0.13
PCDHA3-202ENST00000532566 CDC14CA4D256 554 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 SERINC4A6NH21 518 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 METTL15A6NJ78 407 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 H0Y8X5 98 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 APOC1P02654 83 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 CRMP1Q14194 572 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 SHHQ15465 462 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 ADAMTS14Q8WXS8 1223 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 LYRM4Q9HD34 91 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 PRSS3P35030 304 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 TRIM23P36406 574 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 CAV3P56539 151 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 KIAA0040Q15053 153 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 FOXRED2Q8IWF2 684 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 LSM14AQ8ND56 463 aaKnown RBP14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 CLCC1Q96S66 551 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 KATNB1Q9BVA0 655 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 UBQLN3Q9H347 655 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 DUSP22Q9NRW4 184 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 ICKQ9UPZ9 632 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 CACNG2Q9Y698 323 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 A0A087WUU8 490 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 TSPAN9O75954 239 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 SYPP08247 313 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 HTR1FP30939 366 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 DAP3P51398 398 aaKnown RBP14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 EIF2B1Q14232 305 aaKnown RBP14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 DUSP5Q16690 384 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 CDNFQ49AH0 187 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 TMEM205Q6UW68 189 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 LAX1Q8IWV1 398 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF566Q969W8 418 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 LMF1Q96S06 567 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 MAP3K3Q99759 626 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 OR10A5Q9H207 317 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 CLEC2DQ9UHP7 191 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 TEX46H3BTG2 121 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 CTNSO60931 367 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 TCTN3Q6NUS6 607 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF704Q6ZNC4 412 aaPredicted RBP14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 Q6ZNX1 250 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 PRICKLE2Q7Z3G6 844 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF784Q8NCA9 323 aaPredicted RBP14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 ITFG2Q969R8 447 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 POLE3Q9NRF9 147 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC6A13Q9NSD5 602 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 ABRACLQ9P1F3 81 aa14.24□□□□□ -0.13
PCDHA3-202ENST00000532566 PUDPQ08623 228 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 NKG7Q16617 165 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 EEF1A1P5Q5VTE0 462 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 STEAP3Q658P3 488 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 RNF165Q6ZSG1 346 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 ZFPM2Q8WW38 1151 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 KCTD12Q96CX2 325 aaKnown RBP14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 V9GY05 133 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 SIPA1L1O43166 1804 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 SOCS6O14544 535 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 BRINP1O60477 761 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 TEKQ02763 1124 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 TMEM53Q6P2H8 277 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 RPL22L1Q6P5R6 122 aaKnown RBP14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 UBQLNLQ8IYU4 475 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 OR2A1Q8NGT9 310 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 A0A1B0GVC2 190 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 A6NIN4 97 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 SLC16A7O60669 478 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 RP2O75695 350 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 VNN2O95498 520 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 S100A9P06702 114 aaKnown RBP14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 FOXK2Q01167 660 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 PLP2Q04941 152 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 SYT14P1Q58G82 188 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 FAHD1Q6P587 224 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 METAP1DQ6UB28 335 aaPredicted RBP14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 NRARPQ7Z6K4 114 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 MKRN2Q9H000 416 aaKnown RBP14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 SPNS1Q9H2V7 528 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 LDAHQ9H6V9 325 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 TMEM185BQ9H7F4 350 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 SYNPO2LQ9H987 977 aa14.23□□□□□ -0.13
PCDHA3-202ENST00000532566 ZAR1LA6NP61 321 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 RAD1O60671 282 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 F13BP05160 661 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 PIPP12273 146 aaPredicted RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 TEAD1P28347 426 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 SFTPDP35247 375 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 S100A10P60903 97 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 HSD11B2P80365 405 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 MRPS10P82664 201 aaKnown RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 DLX2Q07687 328 aaPredicted RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 KCTD20Q7Z5Y7 419 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 TMEM150AQ86TG1 271 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 ZNF578Q96N58 590 aaPredicted RBP14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 SEMA4GQ9NTN9 838 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 FBXL3Q9UKT7 428 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.22□□□□□ -0.13
PCDHA3-202ENST00000532566 OR5K3A6NET4 321 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms