RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CH25HO95992 272 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MT-ND5P03915 603 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 IFNA6P05013 189 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 IFNGR1P15260 489 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 RPS2P15880 293 aaKnown RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC6A1P30531 599 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CCR7P32248 378 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC1A3P43003 542 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CDKN1CP49918 316 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 STC1P52823 247 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 TAS2R43P59537 309 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SELENOWP63302 87 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF33AQ06730 810 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CAMK2DQ13557 499 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 GBX1Q14549 363 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CLINT1Q14677 625 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC5A12Q1EHB4 618 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF630Q2M218 657 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 AMZ1Q400G9 498 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 BEX5Q5H9J7 111 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 OR10K2Q6IF99 312 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEM107Q6UX40 140 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 APOOLQ6UXV4 268 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 TRIM46Q7Z4K8 759 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEM151BQ8IW70 566 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 NANOGP1Q8N7R0 232 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 OR14K1Q8NGZ2 314 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MFSD8Q8NHS3 518 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CPNE4Q96A23 557 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 EIF5A2Q9GZV4 153 aaKnown RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SMOC1Q9H4F8 434 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MRPS30Q9NP92 439 aaKnown RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 ISYNA1Q9NPH2 558 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MARCH4Q9P2E8 410 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 C13orf42A0A1B0GVH6 325 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEM200CA6NKL6 621 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 AQP8O94778 261 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 UBXN7O94888 489 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 TXNDC12O95881 172 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 STATHP02808 62 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 PRF1P14222 555 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 RBP2P50120 134 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CLCN7P51798 805 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 AFF3P51826 1226 aaKnown RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 RAB40BQ12829 278 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MLF2Q15773 248 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CST6Q15828 149 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SSX1Q16384 188 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SGCAQ16586 387 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MPEG1Q2M385 716 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 XKR6Q5GH73 641 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 HIST2H3PS2Q5TEC6 136 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 B3GNTL1Q67FW5 361 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 USP53Q70EK8 1073 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 KIAA0907Q7Z7F0 614 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 PEG10Q86TG7 708 aaKnown RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC30A8Q8IWU4 369 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 KLHDC8BQ8IXV7 354 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 UMODL1-AS1Q8N2C9 162 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 LMNTD1Q8N9Z9 388 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SLAMF9Q96A28 289 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 RAD51AP1Q96B01 352 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CDKN2AIPNLQ96HQ2 116 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 KLHL15Q96M94 604 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 ATOH8Q96SQ7 321 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MICU1Q9BPX6 476 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC35A5Q9BS91 424 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SUCNR1Q9BXA5 334 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 EQTNQ9NQ60 294 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 GPRC5BQ9NZH0 403 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 PCDHB1Q9Y5F3 818 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MUC3AQ02505 3323 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MCRIP1C9JLW8 97 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 J3QLW9 94 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 PCDH7O60245 1069 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 FZD6O60353 706 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 IFNGP01579 166 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF19P17023 458 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 GDF5P43026 501 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CXCL12P48061 93 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CRISP3P54108 245 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SKP1P63208 163 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 BATFQ16520 125 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 ST3GAL2Q16842 350 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MANEAQ5SRI9 462 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SFRP5Q5T4F7 317 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MLIPQ5VWP3 458 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF776Q68DI1 518 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 RGS7BPQ6MZT1 257 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 FAHD1Q6P587 224 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 Q6ZSR9 355 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 IQCF1Q8N6M8 205 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 OR51G2Q8NGK0 314 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 OR5D16Q8NGK9 328 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 OR5M9Q8NGP3 310 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 PIGXQ8TBF5 258 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 PHOSPHO1Q8TCT1 267 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 RNF141Q8WVD5 230 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 TSACCQ96A04 125 aaPredicted RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 FUBP1Q96AE4 644 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms