RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 FRMD7Q6ZUT3 714 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 ASRGL1Q7L266 308 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.32■□□□□ 0.04
PKP3-208ENST00000531857 CLHC1Q8NHS4 586 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 JADE3Q92613 823 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 CDS1Q92903 461 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 ZNF775Q96BV0 537 aaPredicted RBP15.32■□□□□ 0.04
PKP3-208ENST00000531857 PPCDCQ96CD2 204 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 ZNF764Q96H86 408 aaPredicted RBP15.32■□□□□ 0.04
PKP3-208ENST00000531857 TSSK3Q96PN8 268 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 PSD2Q9BQI7 771 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 RHNO1Q9BSD3 238 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 BTBD2Q9BX70 525 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 GRIP2Q9C0E4 1043 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 BARX1Q9HBU1 254 aaPredicted RBP15.32■□□□□ 0.04
PKP3-208ENST00000531857 GIN1Q9NXP7 522 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 SH3BP4Q9P0V3 963 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 BAIAP2L1Q9UHR4 511 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 ICAM5Q9UMF0 924 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 CARD8Q9Y2G2 431 aa15.32■□□□□ 0.04
PKP3-208ENST00000531857 A0A1W2PNR3 127 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 FAM234BA2RU67 622 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 ABCD4O14678 606 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 TBX19O60806 448 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 FESP07332 822 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 FAM157CP0CG43 387 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 NQO1P15559 274 aaKnown RBP15.31■□□□□ 0.04
PKP3-208ENST00000531857 SDC1P18827 310 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 OR3A2P47893 321 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 POU6F2P78424 691 aaPredicted RBP15.31■□□□□ 0.04
PKP3-208ENST00000531857 RIPK1Q13546 671 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 PDE7AQ13946 482 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 PPA1Q15181 289 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 KLHL26Q53HC5 615 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.31■□□□□ 0.04
PKP3-208ENST00000531857 C6orf52Q5T4I8 152 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 ZCCHC12Q6PEW1 402 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 EPGNQ6UW88 154 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 ZCCHC23Q6ZST2 131 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 OR2T11Q8NH01 316 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 GPR119Q8TDV5 335 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 ZFP90Q8TF47 636 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 HTRA1Q92743 480 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 METTL2AQ96IZ6 378 aaKnown RBP15.31■□□□□ 0.04
PKP3-208ENST00000531857 USB1Q9BQ65 265 aaKnown RBP15.31■□□□□ 0.04
PKP3-208ENST00000531857 BCO1Q9HAY6 547 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 SIRT3Q9NTG7 399 aaPredicted RBP15.31■□□□□ 0.04
PKP3-208ENST00000531857 C1orf109Q9NX04 203 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 MALRD1Q5VYJ5 2156 aa15.31■□□□□ 0.04
PKP3-208ENST00000531857 GJE1A6NN92 205 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 ITM2AO43736 263 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 HMGN2P05204 90 aaKnown RBP15.3■□□□□ 0.04
PKP3-208ENST00000531857 UROSP10746 265 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 PRKCAP17252 672 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 IGHV1-2P23083 117 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 P2RX1P51575 399 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 CDH11P55287 796 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 TMEM249Q2WGJ8 235 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 RFTN2Q52LD8 501 aaPredicted RBP15.3■□□□□ 0.04
PKP3-208ENST00000531857 Q6ZSR9 355 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 C10orf67Q8IYJ2 551 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 SLC43A2Q8N370 569 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 OR10H5Q8NGA6 315 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 CMTM5Q96DZ9 223 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 FAM120BQ96EK7 910 aaKnown RBP15.3■□□□□ 0.04
PKP3-208ENST00000531857 FCRL1Q96LA6 429 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 ZNF300Q96RE9 604 aaPredicted RBP15.3■□□□□ 0.04
PKP3-208ENST00000531857 CCT7Q99832 543 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 C1orf21Q9H246 121 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 ACSS1Q9NUB1 689 aaPredicted RBP15.3■□□□□ 0.04
PKP3-208ENST00000531857 FAIMQ9NVQ4 179 aa15.3■□□□□ 0.04
PKP3-208ENST00000531857 GPC6Q9Y625 555 aaPredicted RBP15.3■□□□□ 0.04
PKP3-208ENST00000531857 SLC28A1O00337 649 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 SMAD9O15198 467 aaKnown RBP15.29■□□□□ 0.04
PKP3-208ENST00000531857 RGS14O43566 566 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 IDH3AP50213 366 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 NUDT6P53370 316 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 RAC3P60763 192 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 LASP1Q14847 261 aaKnown RBP15.29■□□□□ 0.04
PKP3-208ENST00000531857 NRF1Q16656 503 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 ARL13AQ5H913 290 aaPredicted RBP15.29■□□□□ 0.04
PKP3-208ENST00000531857 C11orf71Q6IPW1 123 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 MUCL1Q96DR8 90 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 THOC1Q96FV9 657 aaKnown RBP15.29■□□□□ 0.04
PKP3-208ENST00000531857 TNFRSF13CQ96RJ3 184 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 STACQ99469 402 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 CACNG6Q9BXT2 260 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 C20orf27Q9GZN8 174 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 PIGUQ9H490 435 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 DUSP22Q9NRW4 184 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 ZCCHC3Q9NUD5 404 aaKnown RBP15.29■□□□□ 0.04
PKP3-208ENST00000531857 KLHL9Q9P2J3 617 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 TAGLN3Q9UI15 199 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 KCNE3Q9Y6H6 103 aa15.29■□□□□ 0.04
PKP3-208ENST00000531857 E7EQL1 145 aa15.28■□□□□ 0.04
PKP3-208ENST00000531857 F12P00748 615 aaPredicted RBP15.28■□□□□ 0.04
PKP3-208ENST00000531857 FGF4P08620 206 aa15.28■□□□□ 0.04
PKP3-208ENST00000531857 KITP10721 976 aa15.28■□□□□ 0.04
PKP3-208ENST00000531857 COX5AP20674 150 aa15.28■□□□□ 0.04
PKP3-208ENST00000531857 SUMO3P55854 103 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms