RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 POU3F2P20265 443 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-206ENST00000531480 RYKP34925 604 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 HTR3AP46098 478 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 IDH2P48735 452 aaKnown RBP13.03□□□□□ -0.32
CPSF1-206ENST00000531480 MAP2K6P52564 334 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 SUCLG1P53597 346 aaKnown RBP13.03□□□□□ -0.32
CPSF1-206ENST00000531480 SELENBP1Q13228 472 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 ACSF3Q4G176 576 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-206ENST00000531480 C1QL3Q5VWW1 255 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 RINLQ6ZS11 566 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 EID3Q8N140 333 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 MARVELD2Q8N4S9 558 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 SMYD1Q8NB12 490 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 OR5M9Q8NGP3 310 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 CDRT15Q96T59 188 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 KCTD14Q9BQ13 255 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-206ENST00000531480 WFDC6Q9BQY6 131 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 TRIM15Q9C019 465 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 PCDHAC1Q9H158 963 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 CALHM2Q9HA72 323 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 ADA2Q9NZK5 511 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 STOML1Q9UBI4 398 aa13.03□□□□□ -0.32
CPSF1-206ENST00000531480 ERRFI1Q9UJM3 462 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-206ENST00000531480 PCNX1Q96RV3 2341 aa13.02□□□□□ -0.32
CPSF1-206ENST00000531480 MPDZO75970 2070 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 CD8B2A6NJW9 211 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 H3BML4 177 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 CXCR6O00574 342 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 LRRTM2O43300 516 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 SEMA7AO75326 666 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 IFNA14P01570 189 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 GP1BBP13224 206 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 TCEA1P23193 301 aaKnown RBP13.02□□□□□ -0.33
CPSF1-206ENST00000531480 ME2P23368 584 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 FKBP2P26885 142 aaKnown RBP13.02□□□□□ -0.33
CPSF1-206ENST00000531480 HTR2AP28223 471 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 CLDN20P56880 219 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 CEACAM7Q14002 265 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 SF3B4Q15427 424 aaKnown RBP eCLIP13.02□□□□□ -0.331e-8■■■■□ 20
CPSF1-206ENST00000531480 NSUN5P2Q63ZY6 315 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 WBP2NLQ6ICG8 309 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 C3orf33Q6P1S2 294 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 ESPNLQ6ZVH7 1005 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 SEM1Q6ZVN7 128 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 ADGRG3Q86Y34 549 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 OR52E4Q8NGH9 312 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 ZNF563Q8TA94 476 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 TUBA1CQ9BQE3 449 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 TTYH2Q9BSA4 534 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 GORASP2Q9H8Y8 452 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 C12orf10Q9HB07 376 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 KLHL28Q9NXS3 571 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 CLCF1Q9UBD9 225 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 TESQ9UGI8 421 aaKnown RBP13.02□□□□□ -0.33
CPSF1-206ENST00000531480 OSGIN1Q9UJX0 560 aa13.02□□□□□ -0.33
CPSF1-206ENST00000531480 MED12LQ86YW9 2145 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 A0A0J9YW62 118 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 MBD3L4A6NDZ8 208 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-206ENST00000531480 MBD3L3A6NE82 208 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-206ENST00000531480 MBD3L5A6NJ08 208 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-206ENST00000531480 CCL21O00585 134 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 ZNF208O43345 1280 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 FRS3O43559 492 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 LDLRP01130 860 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 TIMP3P35625 211 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 CLK1P49759 484 aaKnown RBP13.01□□□□□ -0.33
CPSF1-206ENST00000531480 POLR2HP52434 150 aaKnown RBP13.01□□□□□ -0.33
CPSF1-206ENST00000531480 SELENOWP63302 87 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 MERTKQ12866 999 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 BNIP2Q12982 314 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 NPTX1Q15818 432 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 CYBRD1Q53TN4 286 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 C1orf185Q5T7R7 199 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 ZNF585AQ6P3V2 769 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 MTFR2Q6P444 385 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 CBLL1Q75N03 491 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 LACC1Q8IV20 430 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 LILRA2Q8N149 483 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 RPRMLQ8N4K4 120 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 FAM26EQ8N5C1 309 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 MEIOBQ8N635 442 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 OR4D11Q8NGI4 311 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 MBD3L2Q8NHZ7 208 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-206ENST00000531480 SLC25A43Q8WUT9 341 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-206ENST00000531480 C3orf49Q96BT1 292 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 CTPS2Q9NRF8 586 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 CHRNA9Q9UGM1 479 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 BAG5Q9UL15 447 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 CAMK2AQ9UQM7 478 aa13.01□□□□□ -0.33
CPSF1-206ENST00000531480 GJE1A6NN92 205 aa13□□□□□ -0.33
CPSF1-206ENST00000531480 KDM4EB2RXH2 506 aaPredicted RBP13□□□□□ -0.33
CPSF1-206ENST00000531480 H0YC42 278 aa13□□□□□ -0.33
CPSF1-206ENST00000531480 GLI4P10075 376 aa13□□□□□ -0.33
CPSF1-206ENST00000531480 SHC1P29353 583 aa13□□□□□ -0.33
CPSF1-206ENST00000531480 TACR3P29371 465 aa13□□□□□ -0.33
CPSF1-206ENST00000531480 CEACAM8P31997 349 aaPredicted RBP13□□□□□ -0.33
CPSF1-206ENST00000531480 TPD52P55327 224 aaPredicted RBP13□□□□□ -0.33
CPSF1-206ENST00000531480 RGS8P57771 180 aaPredicted RBP13□□□□□ -0.33
CPSF1-206ENST00000531480 COPZ1P61923 177 aa13□□□□□ -0.33
CPSF1-206ENST00000531480 ADORA2A-AS1P86434 159 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms