RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 C2orf92A0A1B0GVN3 265 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 TRDV1A0A1B0GX56 115 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 TMEM150CB9EJG8 249 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 NPIPB6E9PJ23 425 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 I3L1I5 382 aaPredicted RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 BHLHE40O14503 412 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 YKT6O15498 198 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 FOXS1O43638 330 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 DUX1O43812 170 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 TMEM127O75204 238 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 UPK1BO75841 260 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PIAS2O75928 621 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 LYPD3O95274 346 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PTTG1O95997 202 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 HLA-DPB1P04440 258 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 NGFRP08138 427 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 CYC1P08574 325 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 HBQ1P09105 142 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 MED14OSP0DP75 135 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PNMTP11086 282 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PEPDP12955 493 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 IFI30P13284 250 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 APEHP13798 732 aaKnown RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 GNSP15586 552 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PNLIPP16233 465 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 ZNF3P17036 446 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 TYRP1P17643 537 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 NR4A1P22736 598 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PTBP1P26599 531 aaKnown RBP eCLIP5.12□□□□□ -1.59
PCF11-205ENST00000530906 SLC6A6P31641 620 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 SLC1A3P43003 542 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PPICP45877 212 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 SLC6A8P48029 635 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 FNTBP49356 437 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 RORCP51449 518 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 GAS1P54826 345 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 MLLT10P55197 1068 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 MAZP56270 477 aaKnown RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 HSD11B2P80365 405 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PSG6Q00889 435 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 RPL6Q02878 288 aaKnown RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 TFF2Q03403 129 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 CDC20Q12834 499 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 ITGADQ13349 1161 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 SQSTM1Q13501 440 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 C1orf61Q13536 156 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 UBXN2BQ14CS0 331 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 SSX1Q16384 188 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 MAPK14Q16539 360 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 CLPPQ16740 277 aaPredicted RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 ZNF542PQ5EBM4 170 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 TMEM31Q5JXX7 168 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 LCN1P1Q5VSP4 162 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 WDR74Q6RFH5 385 aaPredicted RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 SMARCD3Q6STE5 483 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 HSDL2Q6YN16 418 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 RTL4Q6ZR62 310 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 QSOX2Q6ZRP7 698 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PRSS41Q7RTY9 318 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 ZNF554Q86TJ5 538 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 NKAIN4Q8IVV8 208 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 OR4N5Q8IXE1 308 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 UBALD2Q8IYN6 164 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 CENPSQ8N2Z9 138 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 KLHL36Q8N4N3 616 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 IQCF1Q8N6M8 205 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 TMEM52Q8NDY8 209 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 C17orf47Q8NEP4 570 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 OR5T3Q8NGG3 340 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 OR8D4Q8NGM9 314 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 OR4C6Q8NH72 309 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 SETD6Q8TBK2 473 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 TMEM255BQ8WV15 326 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 LIPHQ8WWY8 451 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 KIAA1143Q96AT1 154 aaPredicted RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 ZG16BQ96DA0 208 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 KCTD7Q96MP8 289 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 MAP3K3Q99759 626 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 GPA33Q99795 319 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 ASPNQ9BXN1 380 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 ALOXE3Q9BYJ1 711 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PLA2G12AQ9BZM1 189 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 NUAK2Q9H093 628 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 KLHL25Q9H0H3 589 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 DUSP15Q9H1R2 295 aaPredicted RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 OR51E2Q9H255 320 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 KCNN2Q9H2S1 579 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 OR52D1Q9H346 318 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 EGLN3Q9H6Z9 239 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 C12orf49Q9H741 205 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 ZBTB20Q9HC78 741 aaPredicted RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 FAM60AQ9NP50 221 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 MKKSQ9NPJ1 570 aaPredicted RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 CMC2Q9NRP2 79 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 UBQLN4Q9NRR5 601 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 SOHLH2Q9NX45 425 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 CNIH4Q9P003 139 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 RPS6KB2Q9UBS0 482 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 KLHL21Q9UJP4 597 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 SRPK3Q9UPE1 567 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms