RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TMEM272A0A1B0GTI8 110 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TMEM72A0PK05 275 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TBC1D3FA6NER0 549 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TBC1D3LB9A6J9 549 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 E7EQ34 232 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 GAPDHSO14556 408 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 GOSR2O14653 212 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 INHAP05111 366 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 MAT2AP31153 395 aaKnown RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 DGKEP52429 567 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 HNRNPKP61978 463 aaKnown RBP eCLIP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 RAC1P63000 192 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 ZXDBP98169 803 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 HMGN3Q15651 99 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 CPSF6Q16630 551 aaKnown RBP eCLIP7.54□□□□□ -1.23e-7■□□□□ 8.6
CSDE1-214ENST00000530886 VWA2Q5GFL6 755 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 LIPJQ5W064 366 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 FRG2Q64ET8 278 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 GLT8D1Q68CQ7 371 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TBC1D3CQ6IPX1 549 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 LPCAT3Q6P1A2 487 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TBC1D3Q8IZP1 549 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 ZNF461Q8TAF7 563 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 LCN9Q8WX39 176 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 PSMG2Q969U7 264 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 ECHDC3Q96DC8 303 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 MYEOVQ96EZ4 313 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 RHOVQ96L33 236 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 FRG2BQ96QU4 278 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TIMP4Q99727 224 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 EGFL8Q99944 293 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 SEMA3CQ99985 751 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 RNF39Q9H2S5 420 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 LHX6Q9UPM6 363 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 MRPL42Q9Y6G3 142 aaKnown RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 ACOD1A6NK06 481 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 PTGESO14684 152 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 UGDHO60701 494 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 APBB3O95704 486 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 CD2P06729 351 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 HCKP08631 526 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 IL3P08700 152 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 ADRB3P13945 408 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 RPS2P15880 293 aaKnown RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 NQO2P16083 231 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 ATF1P18846 271 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 RAB5AP20339 215 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 LPOP22079 712 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 HSD3B2P26439 372 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 CRABP1P29762 137 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 MC4RP32245 332 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 CDH11P55287 796 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 TAS2R43P59537 309 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 HTRA3P83110 453 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 SRSF3P84103 164 aaKnown RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 ARHGAP1Q07960 439 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 ARHGEF7Q14155 803 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 PNLIPRP3Q17RR3 467 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 C18orf63Q68DL7 685 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 RAB12Q6IQ22 244 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 CXorf57Q6NSI4 855 aaKnown RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 GLT6D1Q7Z4J2 308 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 SCD5Q86SK9 330 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 NUDT13Q86X67 352 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 BEND2Q8NDZ0 799 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 SLC30A7Q8NEW0 376 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 SVIPQ8NHG7 77 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 EID2BQ96D98 161 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 SMARCD1Q96GM5 515 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 PKP4Q99569 1192 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 MED10Q9BTT4 135 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 INPP5EQ9NRR6 644 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 LAMP5Q9UJQ1 280 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 POMT1Q9Y6A1 747 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 SIRT4Q9Y6E7 314 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 NUP210LQ5VU65 1888 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 VWA8A3KMH1 1905 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 A0A1B0GTI1 187 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 URADA6NGE7 173 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 IFITM10A6NMD0 228 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 IDSB3KWA1 339 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 STMND1H3BQB6 276 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 GUCA1CO95843 209 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 F12P00748 615 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 F11P03951 625 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 RHOP08100 348 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 CR2P20023 1033 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 MMP11P24347 488 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 GLP1RP43220 463 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 BIKQ13323 160 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 WSCD1Q658N2 575 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 MBOAT1Q6ZNC8 495 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 ACOT7LQ6ZUV0 252 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 PRSS45Q7RTY3 260 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 OVCH1Q7RTY7 1134 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 DPPA2Q7Z7J5 298 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 PRR18Q8N4B5 295 aa7.54□□□□□ -1.2
CSDE1-214ENST00000530886 PNLDC1Q8NA58 520 aaKnown RBP7.54□□□□□ -1.2
CSDE1-214ENST00000530886 OR52I2Q8NH67 350 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms