RNA–Protein interactions for RNA: ENST00000530005.5

SLC43A3-217, Transcript of solute carrier family 43 member 3, humanhuman

TSL 1 (best)

Gene SLC43A3, Length 1,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-217ENST00000530005 ABCA4P78363 2273 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 AKAP9Q99996 3911 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 A0A0G2JPF8 293 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 HNRNPCL2B2RXH8 293 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 HNRNPCL3B7ZW38 293 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 HNRNPCL1O60812 293 aaKnown RBP17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 CTAG2O75638 210 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 THBS1P07996 1170 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 HNRNPCL4P0DMR1 293 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 ARAFP10398 606 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 GPX2P18283 190 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 APOBEC1P41238 236 aaKnown RBP17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 GUCY1A3Q02108 690 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 FAM27E3Q08E93 113 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 EPS8Q12929 822 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 DAZAP2Q15038 168 aaPredicted RBP17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 PPP4R4Q6NUP7 873 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 GRINAQ7Z429 371 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 LSRQ86X29 649 aaPredicted RBP17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 ADGRG3Q86Y34 549 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 DPP10Q8N608 796 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 OR6K3Q8NGY3 331 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 ZNF563Q8TA94 476 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 TSPEARQ8WU66 669 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 ABHD3Q8WU67 409 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 CPPED1Q9BRF8 314 aaPredicted RBP17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 TMEM120AQ9BXJ8 343 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 TIGARQ9NQ88 270 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 PLSCR4Q9NRQ2 329 aa17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 ZNF443Q9Y2A4 671 aaPredicted RBP17.28■□□□□ 0.36
SLC43A3-217ENST00000530005 PGM3O95394 542 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 EPXP11678 715 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 ENPP1P22413 925 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 PPIBP23284 216 aaKnown RBP17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 SLC7A1P30825 629 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 CCKARP32238 428 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 ACAA2P42765 397 aaKnown RBP17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 IDH2P48735 452 aaKnown RBP17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 GNA13Q14344 377 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 LIN52Q52LA3 116 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 SYT14P1Q58G82 188 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 RNF220Q5VTB9 566 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 CLIP4Q8N3C7 705 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 SLC25A43Q8WUT9 341 aaPredicted RBP17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 OR5B2Q96R09 309 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 SERINC1Q9NRX5 453 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 CHRNA9Q9UGM1 479 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 LEF1Q9UJU2 399 aaPredicted RBP17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 ING1Q9UK53 422 aaPredicted RBP17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 EMC9Q9Y3B6 208 aa17.27■□□□□ 0.35
SLC43A3-217ENST00000530005 CFAP73A6NFT4 308 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 KLK2P20151 261 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 AGTR1P30556 359 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 CPOXP36551 454 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 CD79BP40259 229 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 ADRM1Q16186 407 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 HSP90B2PQ58FF3 399 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 RUNDC3AQ59EK9 446 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 TMPPEQ6ZT21 453 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 FCRLAQ7L513 359 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 ZNF440Q8IYI8 595 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 ARL5BQ96KC2 179 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 ADAM19Q9H013 955 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 RASSF1Q9NS23 344 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 PROCRQ9UNN8 238 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 NDUFAF1Q9Y375 327 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 CCDC168Q8NDH2 2452 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 AKAP6Q13023 2319 aa17.26■□□□□ 0.35
SLC43A3-217ENST00000530005 FREM1Q5H8C1 2179 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 A6NNC1 897 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 SMAD9O15198 467 aaKnown RBP17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 ATP8B1O43520 1251 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 PLGP00747 810 aaPredicted RBP17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 TROVE2P10155 538 aaKnown RBP eCLIP17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 RNPS1Q15287 305 aaKnown RBP17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 GCNT6Q5T4J0 391 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 GTF2IRD2BQ6EKJ0 949 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 GTF2IRD2Q86UP8 949 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 BBS10Q8TAM1 723 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 DACH2Q96NX9 599 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 GPATCH1Q9BRR8 931 aaKnown RBP17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 SPATA9Q9BWV2 254 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 GP6Q9HCN6 339 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 ELOVL5Q9NYP7 299 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 KLHL13Q9P2N7 655 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 OSGIN1Q9UJX0 560 aa17.25■□□□□ 0.35
SLC43A3-217ENST00000530005 ANKRD17O75179 2603 aaKnown RBP17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 IGHV3-15A0A0B4J1V0 119 aa17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 TMEM247A6NEH6 219 aa17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 PABPC4LP0CB38 370 aaKnown RBP17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 GKN3PP0CG01 181 aa17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 PRG2P13727 222 aa17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 ETS2P15036 469 aa17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 SLC1A3P43003 542 aa17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 DIO1P49895 249 aa17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 CTBP2P56545 445 aa17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 LARS2Q15031 903 aaKnown RBP17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 ZSWIM7Q19AV6 140 aa17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 TMEM200AQ86VY9 491 aa17.24■□□□□ 0.35
SLC43A3-217ENST00000530005 SLC43A2Q8N370 569 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms