RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 MKKSQ9NPJ1 570 aaPredicted RBP7.11□□□□□ -1.27
SOX6-211ENST00000528429 SLC22A11Q9NSA0 550 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 MAN2C1Q9NTJ4 1040 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 SEMA4GQ9NTN9 838 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 IMPAD1Q9NX62 359 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 NDRG4Q9ULP0 352 aaKnown RBP7.11□□□□□ -1.27
SOX6-211ENST00000528429 GAB2Q9UQC2 676 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.11□□□□□ -1.27
SOX6-211ENST00000528429 THBS1P07996 1170 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 CT45A8P0DMV1 189 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 CT45A9P0DMV2 189 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 RYKP34925 604 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 GCGRP47871 477 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 ALDH6A1Q02252 535 aaKnown RBP7.11□□□□□ -1.27
SOX6-211ENST00000528429 CDK5R2Q13319 367 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 IL18R1Q13478 541 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 KEAP1Q14145 624 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 SF3A2Q15428 464 aaKnown RBP7.11□□□□□ -1.27
SOX6-211ENST00000528429 ZNF528Q3MIS6 628 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 CT45A2Q5DJT8 189 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 EXOSC6Q5RKV6 272 aaKnown RBP7.11□□□□□ -1.27
SOX6-211ENST00000528429 ZNF770Q6IQ21 691 aaPredicted RBP7.11□□□□□ -1.27
SOX6-211ENST00000528429 PGBD2Q6P3X8 592 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 QSOX2Q6ZRP7 698 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 DCDC5Q6ZRR9 648 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 PHC2Q8IXK0 858 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 PRR22Q8IZ63 422 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 ZNF615Q8N8J6 731 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 GALNT11Q8NCW6 608 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 LHFPL5Q8TAF8 219 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 SLC2A12Q8TD20 617 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 CAPSLQ8WWF8 208 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 CNOT9Q92600 299 aaKnown RBP7.11□□□□□ -1.27
SOX6-211ENST00000528429 SLC38A4Q969I6 547 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 BORCS5Q969J3 196 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 GABARAPL3Q9BY60 117 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 UCK2Q9BZX2 261 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 POLR2J3Q9H1A7 115 aaKnown RBP7.11□□□□□ -1.27
SOX6-211ENST00000528429 C11orf16Q9NQ32 467 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 TIGARQ9NQ88 270 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 PRODH2Q9UF12 536 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 PCDHGA6Q9Y5G7 932 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 PCDHGA1Q9Y5H4 931 aa7.11□□□□□ -1.27
SOX6-211ENST00000528429 EP300Q09472 2414 aaPredicted RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 A0A087WUU8 490 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 IGKV3D-11A0A0A0MRZ8 115 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 CDHR4A6H8M9 788 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 SLC1A7O00341 560 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 SCAF4O95104 1147 aaKnown RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 CNOT4O95628 575 aaKnown RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 LDOC1O95751 146 aaPredicted RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 TP53P04637 393 aaPredicted RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 ZGLP1P0C6A0 271 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 CHMP24386 653 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 CRHBPP24387 322 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 SLC37A1P57057 533 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 RPS3AP61247 264 aaKnown RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 ST3GAL3Q11203 375 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 MADCAM1Q13477 382 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 TRAM2Q15035 370 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 PTGES3Q15185 160 aaKnown RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 ELAVL1Q15717 326 aaKnown RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 NDUFAF6Q330K2 333 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 YOD1Q5VVQ6 348 aaPredicted RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 COX15Q7KZN9 410 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 RANBP3LQ86VV4 465 aaPredicted RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 SLITRK4Q8IW52 837 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 BCORP1Q8N888 145 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 GATSQ8NAP1 163 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 OR52N1Q8NH53 320 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 GRHL3Q8TE85 626 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 DIO2Q92813 273 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 SLC41A3Q96GZ6 507 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 HRASLS5Q96KN8 279 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 ZNF578Q96N58 590 aaPredicted RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 RHNO1Q9BSD3 238 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 HOXD1Q9GZZ0 328 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 SAP130Q9H0E3 1048 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 NXF5Q9H1B4 397 aaKnown RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 POLR1BQ9H9Y6 1135 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 AMBNQ9NP70 447 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 CNIH4Q9P003 139 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 CBLCQ9ULV8 474 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 SLC7A7Q9UM01 511 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 MGAT4BQ9UQ53 548 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 TCRBV16S1A1N1A0A5B0 115 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 IDSB3KWA1 339 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 J3QW42 95 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 ADAP00813 363 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 IFI6P09912 130 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 CCL4P13236 92 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 NR4A1P22736 598 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 MMP11P24347 488 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 RORAP35398 523 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 GGT2P36268 569 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 ZNF136P52737 540 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 DCDP81605 110 aaKnown RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 MAD2L1BPQ15013 274 aaPredicted RBP7.1□□□□□ -1.27
SOX6-211ENST00000528429 FAM69BQ5VUD6 431 aa7.1□□□□□ -1.27
SOX6-211ENST00000528429 LAIR2Q6ISS4 152 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms