RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	KLHL28	Q9NXS3	571 aa		10.49	□□□□□ -0.73
PSMC3-205	ENST00000528362	CCDC167	Q9P0B6	97 aa		10.49	□□□□□ -0.73
PSMC3-205	ENST00000528362	KLHL13	Q9P2N7	655 aa		10.49	□□□□□ -0.73
PSMC3-205	ENST00000528362	NDRG3	Q9UGV2	375 aa		10.49	□□□□□ -0.73
PSMC3-205	ENST00000528362	IGHV3-15	A0A0B4J1V0	119 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362		A0A1W2PPR1	153 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	C16orf97	H3BN30	126 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	CLIC1	O00299	241 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	SMAD9	O15198	467 aa	Known RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	SIAH2	O43255	324 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	GOSR1	O95249	250 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	PABPC4L	P0CB38	370 aa	Known RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	BMP2	P12643	396 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	IL7R	P16871	459 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	APOBEC1	P41238	236 aa	Known RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	KCNJ5	P48544	419 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	IDH2	P48735	452 aa	Known RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	CRISP3	P54108	245 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	RAC3	P60763	192 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	GNA13	Q14344	377 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	SQLE	Q14534	574 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	RNPS1	Q15287	305 aa	Known RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	POU4F3	Q15319	338 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	LIN52	Q52LA3	116 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	PAGE3	Q5JUK9	113 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	GTF2IRD2B	Q6EKJ0	949 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	ZNF550	Q7Z398	422 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	NUFIP2	Q7Z417	695 aa	Known RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	GRINA	Q7Z429	371 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	GTF2IRD2	Q86UP8	949 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	VRK2	Q86Y07	508 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	TUSC5	Q8IXB3	177 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	PEX5L	Q8IYB4	626 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	SLC25A43	Q8WUT9	341 aa	Predicted RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	REXO5	Q96IC2	774 aa	Known RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	ZNF385D	Q9H6B1	395 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	C12orf49	Q9H741	205 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	NPHS2	Q9NP85	383 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	A4GALT	Q9NPC4	353 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	RLIM	Q9NVW2	624 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	TMEM45A	Q9NWC5	275 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	THUMPD1	Q9NXG2	353 aa	Known RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	CALML5	Q9NZT1	146 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	SLAMF8	Q9P0V8	285 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	CHRNA9	Q9UGM1	479 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	DCTN4	Q9UJW0	460 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	ING1	Q9UK53	422 aa	Predicted RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	PCNX3	Q9H6A9	2034 aa		10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.48	□□□□□ -0.73
PSMC3-205	ENST00000528362	UQCRHL	A0A096LP55	91 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	TRBV5-3	A0A0A0MS03	114 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	CDHR4	A6H8M9	788 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	CFAP73	A6NFT4	308 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	FAAH	O00519	579 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	PRKD3	O94806	890 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	FES	P07332	822 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	DIO1	P49895	249 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	IRX1	P78414	480 aa	Predicted RBP	10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	EPS8	Q12929	822 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	AGK	Q53H12	422 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	FBXW10	Q5XX13	1052 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	TFAP2E	Q6VUC0	442 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	STAC2	Q6ZMT1	411 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	ZNF836	Q6ZNA1	936 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	TMPPE	Q6ZT21	453 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	C22orf34	Q6ZV56	151 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	ADGRG3	Q86Y34	549 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	C10orf111	Q8N326	155 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	SLC43A2	Q8N370	569 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	CLIP4	Q8N3C7	705 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	OR52P1P	Q8NH57	321 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	MAL2	Q969L2	176 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	ARL5B	Q96KC2	179 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	PSD2	Q9BQI7	771 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	MED18	Q9BUE0	208 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	KLHL4	Q9C0H6	718 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	OR11A1	Q9GZK7	315 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	GP6	Q9HCN6	339 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	VAPA	Q9P0L0	249 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	ST6GALNAC2	Q9UJ37	374 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	OSGIN1	Q9UJX0	560 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	ZNF443	Q9Y2A4	671 aa	Predicted RBP	10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362	CHST2	Q9Y4C5	530 aa		10.47	□□□□□ -0.73
PSMC3-205	ENST00000528362		A0A0G2JPF8	293 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	DEFB108A	A8MXU0	73 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	HNRNPCL2	B2RXH8	293 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	HNRNPCL3	B7ZW38	293 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	CASK	O14936	926 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	CYTIP	O60759	359 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	HNRNPCL1	O60812	293 aa	Known RBP	10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	YES1	P07947	543 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	THBS1	P07996	1170 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	GKN3P	P0CG01	181 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	HNRNPCL4	P0DMR1	293 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	TFPI	P10646	304 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	NCF2	P19878	526 aa	Predicted RBP	10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	SLC1A3	P43003	542 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	IST1	P53990	364 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	FADD	Q13158	208 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	TMEM201	Q5SNT2	666 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms