RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 A0A1W2PQM1 296 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 DHRS12A0PJE2 317 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ELOVL7A1L3X0 281 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 URADA6NGE7 173 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 MBD3L5A6NJ08 208 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 DBX1A6NMT0 343 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ZAR1LA6NP61 321 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 MYO1GB0I1T2 1018 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 H0YAE9 185 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 I3L1I5 382 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 CXCR6O00574 342 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 HNRNPRO43390 633 aaKnown RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 CIDEAO60543 219 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 GALR3O60755 368 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 B4GALT2O60909 372 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 LDB3O75112 727 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 CREG1O75629 220 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 KCNK5O95279 499 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ZBTB11O95625 1053 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 ZCCHC18P0CG32 403 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 CLUP10909 449 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ETFAP13804 333 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 FOLR1P15328 257 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 GGT1P19440 569 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 CSNK2A2P19784 350 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 ZNF10P21506 573 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 GALP22466 123 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 UQCRC2P22695 453 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 PPIBP23284 216 aaKnown RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 CFPP27918 469 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 NTSP30990 170 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 BMI1P35226 326 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 THBS4P35443 961 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 BUD31P41223 144 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 FRKP42685 505 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 CRATP43155 626 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 TSFMP43897 325 aaKnown RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 GSTM5P46439 218 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 MVDP53602 400 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 CARD18P57730 90 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 TIRAPP58753 221 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 MAT1AQ00266 395 aaKnown RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 SLC34A1Q06495 639 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 C17orf67Q0P5P2 114 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 TP53BP2Q13625 1128 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 NR1D2Q14995 579 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 NCF4Q15080 339 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 RGNQ15493 299 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 TRIP10Q15642 601 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 LRRC36Q1X8D7 754 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 PRTGQ2VWP7 1150 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 SPDYE7PQ495Y7 208 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 SPATS1Q496A3 300 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 PRAMEF17Q5VTA0 474 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 LPCAT4Q643R3 524 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 FAM90A2PQ658T7 463 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 SFRP4Q6FHJ7 346 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 HMBOX1Q6NT76 420 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 CCDC144NLQ6NUI1 221 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 SLC48A1Q6P1K1 146 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ZFP1Q6P2D0 407 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 TMEM53Q6P2H8 277 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 TNFAIP8L2Q6P589 184 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 AAGABQ6PD74 315 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 CLEC2AQ6UVW9 174 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ENPP6Q6UWR7 440 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 LRRC74BQ6ZQY2 392 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 WDR53Q7Z5U6 358 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 RABEPKQ7Z6M1 372 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 AMIGO2Q86SJ2 522 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 PTOV1Q86YD1 416 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 NKAIN4Q8IVV8 208 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 TUSC5Q8IXB3 177 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 AQP12AQ8IXF9 295 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ADGRG5Q8IZF4 528 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 HORMAD2Q8N7B1 307 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 FAM86B1Q8N7N1 296 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 TTC29Q8NA56 475 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 OR9A2Q8NGT5 310 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 OR1L3Q8NH93 324 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 B4GALNT2Q8NHY0 566 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 CANT1Q8WVQ1 401 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 OR5P2Q8WZ92 322 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 LZICQ8WZA0 190 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 KAT2AQ92830 837 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 MAL2Q969L2 176 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ELP4Q96EB1 424 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 NEURL3Q96EH8 262 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ZBED6CLQ96FA7 236 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 OTUB1Q96FW1 271 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 ZNF764Q96H86 408 aaPredicted RBP3.85□□□□□ -1.79
CD44-226ENST00000527889 SLC35G5Q96KT7 338 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 C10orf90Q96M02 699 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 ZNF285Q96NJ3 590 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 AMDHD1Q96NU7 426 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 CD180Q99467 661 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 PKP2Q99959 881 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
CD44-226ENST00000527889 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms