RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 C3orf30Q96M34 536 aa20.76■□□□□ 0.91
CPSF1-202ENST00000527827 TNFRSF13CQ96RJ3 184 aa20.76■□□□□ 0.91
CPSF1-202ENST00000527827 DHRS9Q9BPW9 319 aa20.76■□□□□ 0.91
CPSF1-202ENST00000527827 HEATR1Q9H583 2144 aaKnown RBP20.76■□□□□ 0.91
CPSF1-202ENST00000527827 ATAD3AQ9NVI7 634 aa20.76■□□□□ 0.91
CPSF1-202ENST00000527827 SLC25A15Q9Y619 301 aa20.76■□□□□ 0.91
CPSF1-202ENST00000527827 ELOA3DA6NLF2 546 aaPredicted RBP20.75■□□□□ 0.91
CPSF1-202ENST00000527827 ZNF716A6NP11 495 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 SULT2B1O00204 365 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 PHF1O43189 567 aaPredicted RBP20.75■□□□□ 0.91
CPSF1-202ENST00000527827 NPHS1O60500 1241 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 LYPLA1O75608 230 aaPredicted RBP20.75■□□□□ 0.91
CPSF1-202ENST00000527827 CYP7B1O75881 506 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 ALDH3A1P30838 453 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 NTF4P34130 210 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 ZNF83P51522 516 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 DSCR9P59020 149 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 HBA1P69905 142 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 LOXL1Q08397 574 aaPredicted RBP20.75■□□□□ 0.91
CPSF1-202ENST00000527827 MERTKQ12866 999 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 PDK3Q15120 406 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 GPR68Q15743 365 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 ELOA3BQ3SY89 546 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 SYT14P1Q58G82 188 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 C6orf136Q5SQH8 315 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 CLEC2AQ6UVW9 174 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 B3GLCTQ6Y288 498 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 MTDHQ86UE4 582 aaKnown RBP20.75■□□□□ 0.91
CPSF1-202ENST00000527827 RIMKLAQ8IXN7 391 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 ELOA3Q8NG57 546 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 OR52N5Q8NH56 324 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 SERINC1Q9NRX5 453 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 MGAT4BQ9UQ53 548 aa20.75■□□□□ 0.91
CPSF1-202ENST00000527827 FCMRO60667 390 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 UGT2B17O75795 530 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 PTAFRP25105 342 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 CSNK2A1P68400 391 aaPredicted RBP20.74■□□□□ 0.91
CPSF1-202ENST00000527827 VLDLRP98155 873 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 IL23RQ5VWK5 629 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 SLC22A25Q6T423 547 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 MUC15Q8N387 334 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 AGR3Q8TD06 166 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 BHLHE41Q9C0J9 482 aaPredicted RBP20.74■□□□□ 0.91
CPSF1-202ENST00000527827 PPCSQ9HAB8 311 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 ACER3Q9NUN7 267 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 EMC3Q9P0I2 261 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 CDC42EP3Q9UKI2 254 aa20.74■□□□□ 0.91
CPSF1-202ENST00000527827 A0A1W2PR80 420 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 CFLARO15519 480 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 SLU7O95391 586 aaKnown RBP20.73■□□□□ 0.91
CPSF1-202ENST00000527827 CSTAP01040 98 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 DHRS4L1P0CG22 281 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 CD40P25942 277 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 FOXG1P55316 489 aaPredicted RBP20.73■□□□□ 0.91
CPSF1-202ENST00000527827 CHRNEQ04844 493 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 ATP6AP1LQ52LC2 224 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 FBXL14Q8N1E6 418 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 UBE2J2Q8N2K1 259 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 ZNF525Q8N782 197 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 UBLCP1Q8WVY7 318 aaPredicted RBP20.73■□□□□ 0.91
CPSF1-202ENST00000527827 TMEM234Q8WY98 164 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 APH1AQ96BI3 265 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 PRPF18Q99633 342 aaKnown RBP20.73■□□□□ 0.91
CPSF1-202ENST00000527827 DUSP26Q9BV47 211 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 MECRQ9BV79 373 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 POU2F3Q9UKI9 436 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 MKLN1Q9UL63 735 aa20.73■□□□□ 0.91
CPSF1-202ENST00000527827 NOSIPQ9Y314 301 aaKnown RBP20.73■□□□□ 0.91
CPSF1-202ENST00000527827 CIB4A0PJX0 185 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 STX11O75558 287 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 AK1P00568 194 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 UBTFL6P0CB48 400 aaPredicted RBP20.72■□□□□ 0.91
CPSF1-202ENST00000527827 PGCP20142 388 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 MATN1P21941 496 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 ARRB2P32121 409 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 SOAT1P35610 550 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 RAB35Q15286 201 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 MAPK14Q16539 360 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 ARHGAP11BQ3KRB8 267 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 BHLHB9Q6PI77 547 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 KLHL17Q6TDP4 642 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 C6orf120Q7Z4R8 191 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 CLEC4FQ8N1N0 589 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 FNDC5Q8NAU1 212 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 SLC25A43Q8WUT9 341 aaPredicted RBP20.72■□□□□ 0.91
CPSF1-202ENST00000527827 CCDC106Q9BWC9 280 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 ZNF350Q9GZX5 532 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 EML4Q9HC35 981 aaKnown RBP20.72■□□□□ 0.91
CPSF1-202ENST00000527827 TMEM160Q9NX00 188 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 MKS1Q9NXB0 559 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 MALRD1Q5VYJ5 2156 aa20.72■□□□□ 0.91
CPSF1-202ENST00000527827 DUXAA6NLW8 204 aa20.71■□□□□ 0.91
CPSF1-202ENST00000527827 CCT8L1PA6NM43 557 aa20.71■□□□□ 0.91
CPSF1-202ENST00000527827 H7C417 338 aa20.71■□□□□ 0.91
CPSF1-202ENST00000527827 BCAS1O75363 584 aaPredicted RBP20.71■□□□□ 0.91
CPSF1-202ENST00000527827 TFPIP10646 304 aa20.71■□□□□ 0.91
CPSF1-202ENST00000527827 SLC25A16P16260 332 aa20.71■□□□□ 0.91
CPSF1-202ENST00000527827 PRPS1L1P21108 318 aa20.71■□□□□ 0.91
CPSF1-202ENST00000527827 FABP6P51161 128 aa20.71■□□□□ 0.91
CPSF1-202ENST00000527827 ZCCHC23Q6ZST2 131 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms