RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 J3QRE1 110 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 PLPP2O43688 288 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 STX11O75558 287 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 UBL3O95164 117 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 KLF8O95600 359 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 CLUP10909 449 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 POLR2CP19387 275 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 MAKP20794 623 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 BTN3A2P78410 334 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 TRAM1Q15629 374 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 HNRNPA1L2Q32P51 320 aaKnown RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 MTSS1LQ765P7 747 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 CHMP1BQ7LBR1 199 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 FTMTQ8N4E7 242 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 SLC44A3Q8N4M1 653 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 FAM160A2Q8N612 972 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 BMPERQ8N8U9 685 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 PTP4A1Q93096 173 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 ARSGQ96EG1 525 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 INSM2Q96T92 566 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 GAS2L1Q99501 681 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 TMEM168Q9H0V1 697 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 DLL4Q9NR61 685 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 SLC22A31A6NKX4 558 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 MAGEB4O15481 346 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 ANKRD34CP0C6C1 535 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 LCN1P31025 176 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 PTGS2P35354 604 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 FOXK2Q01167 660 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 GPR139Q6DWJ6 353 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 ERN2Q76MJ5 926 aaKnown RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 RANBP3LQ86VV4 465 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 HDDC3Q8N4P3 179 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF527Q8NB42 609 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 OR14C36Q8NHC7 312 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 SMPDL3BQ92485 455 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 MENTQ9BUN1 341 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 LMAN2LQ9H0V9 348 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 C20orf141Q9NUB4 165 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 RDH8Q9NYR8 311 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 CD207Q9UJ71 328 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 SCP2D1Q9UJQ7 156 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 KCNK6Q9Y257 313 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 AK6Q9Y3D8 172 aaKnown RBP11.58□□□□□ -0.56
CAPN1-208ENST00000527323 MEIKINA0A087WXM9 373 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 A0A0G2JK05 382 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 H0Y8X5 98 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 M0R233 179 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 MPC2O95563 127 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 HPXP02790 462 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 HRGP04196 525 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 ATF1P18846 271 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 CTHP32929 405 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 TAS2R43P59537 309 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 CDK3Q00526 305 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 AANATQ16613 207 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 KIAA1324Q6UXG2 1013 aaKnown RBP11.57□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF836Q6ZNA1 936 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 FRRS1Q6ZNA5 592 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 RTL4Q6ZR62 310 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 BTN2A1Q7KYR7 527 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 RD3Q7Z3Z2 195 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 BPHLQ86WA6 291 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-208ENST00000527323 OR4N5Q8IXE1 308 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 DEFB123Q8N688 67 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 OR2L5Q8NG80 312 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 OR5J2Q8NH18 312 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 OR4C6Q8NH72 309 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 TMEM239Q8WW34 195 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 ERMAPQ96PL5 475 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-208ENST00000527323 JAM3Q9BX67 310 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 FLVCR2Q9UPI3 526 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 MAB21L2Q9Y586 359 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 TRAPPC13A5PLN9 417 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 RIIAD1A6NNX1 92 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 FLRT2O43155 660 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 RCBTB2O95199 551 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 CFDP00746 253 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-208ENST00000527323 WNT1P04628 370 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 APODP05090 189 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 UBL4AP11441 157 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 P2RY2P41231 377 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 RAB28P51157 221 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 MMP15P51511 669 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 HCCSP53701 268 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 TSPAN5P62079 268 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 TMEM196Q5HYL7 178 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 LINGO2Q7L985 606 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 GALNT11Q8NCW6 608 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 TMIEQ8NEW7 156 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 OR13C2Q8NGS9 318 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 BRIX1Q8TDN6 353 aaKnown RBP11.57□□□□□ -0.56
CAPN1-208ENST00000527323 HMGB4Q8WW32 186 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 OTUB2Q96DC9 234 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 ORAI3Q9BRQ5 295 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 FN3KQ9H479 309 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 ERVMER34-1Q9H9K5 563 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 FBXL4Q9UKA2 621 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms