RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 CLDN22Q8N7P3 220 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 ANKRD53Q8N9V6 530 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 OR5T3Q8NGG3 340 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 OR8D4Q8NGM9 314 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 ACOT11Q8WXI4 607 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 FATE1Q969F0 183 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 NXPE3Q969Y0 559 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 PDXPQ96GD0 296 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 INSM2Q96T92 566 aaPredicted RBP6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 TMEM43Q9BTV4 400 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 TMEM45AQ9NWC5 275 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 SPHK1Q9NYA1 384 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 ERVK-19Q9WJR5 959 aa6.47□□□□□ -1.37
TGFBR3-207ENST00000525962 A0A1W2PQU0 124 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 A0A1W2PR48 441 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 TCRBV16S1A1N1A0A5B0 115 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 C1orf226A1L170 272 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 TRABD2BA6NFA1 517 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 SLC22A31A6NKX4 558 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 A8MVJ9 347 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 CSTAP01040 98 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 LIMS3P0CW19 117 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 LIMS4P0CW20 117 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 GIMD1P0DJR0 217 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 PCSK2P16519 638 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 GABRB1P18505 474 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 HIST1H1TP22492 207 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 TRHRP34981 398 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 PPM1AP35813 382 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 RAD52P43351 418 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 ERVFC1P60507 584 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 CAMK2BQ13554 666 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 SMCO1Q147U7 214 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 SFRP5Q5T4F7 317 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 ZNF322Q6U7Q0 402 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 GDF7Q7Z4P5 450 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 ZFP82Q8N141 532 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 NEURL3Q96EH8 262 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 SGTBQ96EQ0 304 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 TMEM41AQ96HV5 264 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 METTL2AQ96IZ6 378 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 ABHD1Q96SE0 405 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 SDHCQ99643 169 aaPredicted RBP6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 NOX4Q9NPH5 578 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 MRPS33Q9Y291 106 aaKnown RBP6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 SLC6A5Q9Y345 797 aa6.46□□□□□ -1.37
TGFBR3-207ENST00000525962 A0A1B0GTH9 108 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 TMEM72A0PK05 275 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 CARNS1A5YM72 827 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 B4DGG1 531 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 GPR89AB7ZAQ6 455 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 SOX1O00570 391 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 UGDHO60701 494 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 TACSTD2P09758 323 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 ZDHHC11BP0C7U3 371 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 GPR89BP0CG08 455 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 COL11A2P13942 1736 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 PVALBP20472 110 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 CRYBA2P53672 197 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 EIF4EBP2Q13542 120 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 HTR4Q13639 388 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 OR1Q1Q15612 314 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 UNQ6126/PRO20091Q6UXV3 157 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 SHISA6Q6ZSJ9 500 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 STX12Q86Y82 276 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 LIX1LQ8IVB5 337 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 LRRC25Q8N386 305 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 OR52E1Q8NGJ3 308 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 OR52I2Q8NH67 350 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 ARRDC3Q96B67 414 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 DTD2Q96FN9 168 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 PEX11GQ96HA9 241 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 PARP12Q9H0J9 701 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 TSPAN10Q9H1Z9 355 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 SIDT1Q9NXL6 827 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 SLC45A1Q9Y2W3 748 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 SGK494L7N484 410 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 M0QYG6 137 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 CDC40O60508 579 aaKnown RBP eCLIP6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 SELENOFO60613 162 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 SCGNO76038 276 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 RD3LP0DJH9 198 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 ZNF35P13682 527 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 LSSP48449 732 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 ILF3Q12906 894 aaKnown RBP eCLIP6.46□□□□□ -1.385e-9■■■■■ 30.6
TGFBR3-207ENST00000525962 TSPAN31Q12999 210 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 RAB33AQ14088 237 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 DEFB115Q30KQ5 88 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 AMZ1Q400G9 498 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 HEPHL1Q6MZM0 1159 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 KDM8Q8N371 416 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 C17orf47Q8NEP4 570 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 OR4Q3Q8NH05 313 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 NPRL2Q8WTW4 380 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 CNOT9Q92600 299 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 CAPNS2Q96L46 248 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 ATF6BQ99941 703 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 PTDSS2Q9BVG9 487 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 TMEM38AQ9H6F2 299 aa6.46□□□□□ -1.38
TGFBR3-207ENST00000525962 MCCC2Q9HCC0 563 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms