RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SLC44A3Q8N4M1 653 aa4□□□□□ -1.77
CD44-213ENST00000525209 TBC1D19Q8N5T2 526 aa4□□□□□ -1.77
CD44-213ENST00000525209 TEX45Q8NA69 505 aa4□□□□□ -1.77
CD44-213ENST00000525209 OR2AP1Q8NGE2 309 aa4□□□□□ -1.77
CD44-213ENST00000525209 OR4C15Q8NGM1 316 aa4□□□□□ -1.77
CD44-213ENST00000525209 THAP6Q8TBB0 222 aa4□□□□□ -1.77
CD44-213ENST00000525209 MRAPQ8TCY5 172 aa4□□□□□ -1.77
CD44-213ENST00000525209 MAGEE2Q8TD90 523 aaPredicted RBP4□□□□□ -1.77
CD44-213ENST00000525209 SLC25A43Q8WUT9 341 aaPredicted RBP4□□□□□ -1.77
CD44-213ENST00000525209 TM9SF4Q92544 642 aa4□□□□□ -1.77
CD44-213ENST00000525209 PSMG2Q969U7 264 aa4□□□□□ -1.77
CD44-213ENST00000525209 BIRC7Q96CA5 298 aa4□□□□□ -1.77
CD44-213ENST00000525209 BPIFA2Q96DR5 249 aa4□□□□□ -1.77
CD44-213ENST00000525209 TIMD4Q96H15 378 aa4□□□□□ -1.77
CD44-213ENST00000525209 ZNF419Q96HQ0 510 aaPredicted RBP4□□□□□ -1.77
CD44-213ENST00000525209 C10orf90Q96M02 699 aa4□□□□□ -1.77
CD44-213ENST00000525209 TNFRSF13CQ96RJ3 184 aa4□□□□□ -1.77
CD44-213ENST00000525209 SLC38A3Q99624 504 aa4□□□□□ -1.77
CD44-213ENST00000525209 CCDC28BQ9BUN5 200 aa4□□□□□ -1.77
CD44-213ENST00000525209 SPRY4Q9C004 299 aa4□□□□□ -1.77
CD44-213ENST00000525209 GPN2Q9H9Y4 310 aaPredicted RBP4□□□□□ -1.77
CD44-213ENST00000525209 PNRC2Q9NPJ4 139 aaKnown RBP4□□□□□ -1.77
CD44-213ENST00000525209 NANSQ9NR45 359 aa4□□□□□ -1.77
CD44-213ENST00000525209 SLC17A5Q9NRA2 495 aa4□□□□□ -1.77
CD44-213ENST00000525209 ABCB10Q9NRK6 738 aa4□□□□□ -1.77
CD44-213ENST00000525209 SERTAD4Q9NUC0 356 aa4□□□□□ -1.77
CD44-213ENST00000525209 GPR83Q9NYM4 423 aa4□□□□□ -1.77
CD44-213ENST00000525209 IL36GQ9NZH8 169 aa4□□□□□ -1.77
CD44-213ENST00000525209 MAN1B1Q9UKM7 699 aa4□□□□□ -1.77
CD44-213ENST00000525209 NUP50Q9UKX7 468 aa4□□□□□ -1.77
CD44-213ENST00000525209 OAZ3Q9UMX2 235 aa4□□□□□ -1.77
CD44-213ENST00000525209 MAP3K2Q9Y2U5 619 aa4□□□□□ -1.77
CD44-213ENST00000525209 PRG3Q9Y2Y8 225 aaPredicted RBP4□□□□□ -1.77
CD44-213ENST00000525209 HYOU1Q9Y4L1 999 aa4□□□□□ -1.77
CD44-213ENST00000525209 TBL2Q9Y4P3 447 aaKnown RBP4□□□□□ -1.77
CD44-213ENST00000525209 FKBP7Q9Y680 259 aa4□□□□□ -1.77
CD44-213ENST00000525209 COLEC10Q9Y6Z7 277 aa4□□□□□ -1.77
CD44-213ENST00000525209 FGD6Q6ZV73 1430 aa4□□□□□ -1.77
CD44-213ENST00000525209 RIMS2Q9UQ26 1411 aa4□□□□□ -1.77
CD44-213ENST00000525209 KIF15Q9NS87 1388 aa4□□□□□ -1.77
CD44-213ENST00000525209 BRWD3Q6RI45 1802 aa4□□□□□ -1.77
CD44-213ENST00000525209 TRBV9A0A0B4J1U6 114 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 CCDC182A6NF36 153 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 MROH6A6NGR9 719 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 C9orf118A6NHY6 69 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ARGFXA6NJG6 315 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 OVOL3O00110 214 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 GATCO43716 136 aaKnown RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 SYNGR3O43761 229 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 CDC14BO60729 498 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ADAP1O75689 374 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 SC5DO75845 299 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 WISP2O76076 250 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 VAMP5O95183 116 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 H2BFMP0C1H6 154 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 OR4E1P0C645 316 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ANXA3P12429 323 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 HOXB2P14652 356 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 CR2P20023 1033 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 PSMB5P28074 263 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 EPHA2P29317 976 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 HOXA7P31268 230 aaPredicted RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 TNFSF8P32971 234 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 MAGEA6P43360 314 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 CAPZBP47756 277 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 RPL14P50914 215 aaKnown RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 ERVK11-1P61568 191 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ARF6P62330 175 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 SRSF3P84103 164 aaKnown RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 HHEXQ03014 270 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 SMARCB1Q12824 385 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ZP4Q12836 540 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 KLF5Q13887 457 aaPredicted RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 CTTNQ14247 550 aaKnown RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 ATXN7L3Q14CW9 347 aaPredicted RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 PDK2Q15119 407 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ZBTB6Q15916 424 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 IMPG1Q17R60 797 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ACCSLQ4AC99 568 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 SLC22A6Q4U2R8 563 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 TIGD2Q4W5G0 525 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 BEND3Q5T5X7 828 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 SEL1L2Q5TEA6 688 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 REEP3Q6NUK4 255 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 PRMT9Q6P2P2 845 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 LEG1Q6P5S2 330 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ENPP6Q6UWR7 440 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 C17orf107Q6ZR85 190 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ZNF621Q6ZSS3 439 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ASRGL1Q7L266 308 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 SLC29A4Q7RTT9 530 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 CTU1Q7Z7A3 348 aaKnown RBP3.99□□□□□ -1.77
CD44-213ENST00000525209 C17orf64Q86WR6 236 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 ZNF677Q86XU0 584 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 JAGN1Q8N5M9 183 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 CDRT4Q8N9R6 151 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 OR2AK2Q8NG84 335 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 OR4F6Q8NGB9 312 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 OR11H4Q8NGC9 324 aa3.99□□□□□ -1.77
CD44-213ENST00000525209 OR52I1Q8NGK6 324 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms