RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	ZNF275	Q9NSD4	429 aa	Predicted RBP	3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	THYN1	Q9P016	225 aa		3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PDP1	Q9P0J1	537 aa	Predicted RBP	3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	FBXO7	Q9Y3I1	522 aa		3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PUS1	Q9Y606	427 aa	Known RBP eCLIP	3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	BZW2	Q9Y6E2	419 aa	Known RBP	3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	POLR1A	O95602	1720 aa	Predicted RBP	3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ABCC3	O15438	1527 aa		3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	KDM5D	Q9BY66	1539 aa		3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ROCK2	O75116	1388 aa	Known RBP	3.63	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PIK3C2B	O00750	1634 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	NAIP	Q13075	1403 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ERBIN	Q96RT1	1412 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PRDM15	P57071	1507 aa	Predicted RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	TEX48	A0A1B0GUV7	120 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	OR6C70	A6NIJ9	312 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	OR2AG2	A6NM03	316 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	TRPC5OS	A6NMA1	111 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	YJEFN3	A6XGL0	299 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	HAS3	O00219	553 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	CALU	O43852	315 aa	Predicted RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	DUSP11	O75319	330 aa	Known RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	CCNB2	O95067	398 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	IFNA14	P01570	189 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	CXCL10	P02778	98 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	HMGN1	P05114	100 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	IL6	P05231	212 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PGK2	P07205	417 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	OR9G9	P0C7N8	305 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	TRIM49	P0CI25	452 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	TRIM49C	P0CI26	452 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	MLN	P12872	115 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	FOSL2	P15408	326 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	BCL3	P20749	454 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	NT5E	P21589	574 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	MARCKS	P29966	332 aa	Predicted RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	SPAM1	P38567	509 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	NSF	P46459	744 aa	Known RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	RPS5	P46782	204 aa	Known RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	CDH6	P55285	790 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	SRPX	P78539	464 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	BST1	Q10588	318 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ART3	Q13508	389 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	DNAL1	Q4LDG9	190 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	UNC50	Q53HI1	259 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	BEX5	Q5H9J7	111 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	CDKL4	Q5MAI5	379 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	C9orf66	Q5T8R8	295 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	NCR3LG1	Q68D85	454 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	FAAP20	Q6NZ36	180 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	STEAP1B	Q6NZ63	245 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	CDC42EP5	Q6NZY7	148 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	UTS2B	Q765I0	119 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	COPS6	Q7L5N1	327 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	DCXR	Q7Z4W1	244 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	OR52B4	Q8NGK2	314 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	OR4Q3	Q8NH05	313 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ZNF596	Q8TC21	504 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	FANK1	Q8TC84	345 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PCNP	Q8WW12	178 aa	Known RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	TOP1MT	Q969P6	601 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ZNF514	Q96K75	400 aa	Predicted RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ZNF317	Q96PQ6	595 aa	Predicted RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PANX1	Q96RD7	426 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	TESK2	Q96S53	571 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	RIT2	Q99578	217 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	MFF	Q9GZY8	342 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	DNTTIP1	Q9H147	329 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	NT5DC2	Q9H857	520 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	MOB1A	Q9H8S9	216 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	MARCH7	Q9H992	704 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	NMUR1	Q9HB89	426 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	NEK6	Q9HC98	313 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	COPS7A	Q9UBW8	275 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ENPP5	Q9UJA9	477 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	GGA2	Q9UJY4	613 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	SPATA2	Q9UM82	520 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ATG4B	Q9Y4P1	393 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	LRRC42	Q9Y546	428 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	CACNG2	Q9Y698	323 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	UGGT1	Q9NYU2	1555 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ZMYM6	O95789	1325 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	NUP155	O75694	1391 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	CPD	O75976	1380 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	RAB3GAP2	Q9H2M9	1393 aa		3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	TP53BP1	Q12888	1972 aa	Predicted RBP	3.62	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PTPRU	Q92729	1446 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	SETD5	Q9C0A6	1442 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	UBR1	Q8IWV7	1749 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	FAM135A	Q9P2D6	1515 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	SYNM	O15061	1565 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	TCP11X1	B4DZS4	312 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	SH2D1B	O14796	132 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	ATP8B1	O43520	1251 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	GPX5	O75715	221 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	PDE5A	O76074	875 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	AHSA1	O95433	338 aa		3.61	□□□□□ -1.83
CTNNA1-238	ENST00000523298	NSA2	O95478	260 aa	Known RBP	3.61	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms