RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 M0R143 59 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 HS3ST1O14792 307 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 RGS16O15492 202 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 RBMXL2O75526 392 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ZIC2O95409 532 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 CPNE6O95741 557 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ATP1A1P05023 1023 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 RPLP0P05388 317 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 C8GP07360 202 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 FGF2P09038 288 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 JMJD7P0C870 316 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 UBCP0CG48 685 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ADORA3P0DMS8 318 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 C1GALT1C1LP0DN25 315 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 CD19P15391 556 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 TSPAN8P19075 237 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 CSNK2A2P19784 350 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 BGNP21810 368 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 FDXRP22570 491 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 TIMP3P35625 211 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 GRIA1P42261 906 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 PTGFRP43088 359 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 MAGEA12P43365 314 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 KIR2DL1P43626 348 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 PDLIM4P50479 330 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 SLC16A1P53985 500 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ZP1P60852 638 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ZXDBP98169 803 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 DMWDQ09019 674 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 GK2Q14410 553 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 EIF4HQ15056 248 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 VAMP3Q15836 100 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 LPAL2Q16609 132 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 CYP1B1Q16678 543 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 C5orf47Q569G3 176 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 RAB41Q5JT25 222 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 TBCELQ5QJ74 424 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 PLA2G2CQ5R387 149 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 TSTD2Q5T7W7 516 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 MROH9Q5TGP6 573 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 PMS2CLQ68D20 193 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 DESI1Q6ICB0 168 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 C16orf46Q6P387 395 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ZNF836Q6ZNA1 936 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 RIPOR1Q6ZS17 1223 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 PIWIL4Q7Z3Z4 852 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 CLNKQ7Z7G1 428 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 TMED4Q7Z7H5 227 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 XYLT1Q86Y38 959 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 NAXDQ8IW45 347 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ZC3H7AQ8IWR0 971 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 CPXM2Q8N436 756 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 FSTL5Q8N475 847 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 OR10W1Q8NGF6 305 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 OR5T3Q8NGG3 340 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 TERB2Q8NHR7 220 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 DYNC2LI1Q8TCX1 351 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 RNASE8Q8TDE3 154 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ASB11Q8WXH4 323 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ARSGQ96EG1 525 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 MVB12AQ96EY5 273 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 WBP1Q96G27 269 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 HRASLS5Q96KN8 279 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 C3orf30Q96M34 536 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 PTCHD1Q96NR3 888 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 SORCS2Q96PQ0 1159 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 DIRC2Q96SL1 478 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 HOPXQ9BPY8 73 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ORAI3Q9BRQ5 295 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 NICN1Q9BSH3 213 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 FNDC11Q9BVV2 318 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 JAM3Q9BX67 310 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 KLF16Q9BXK1 252 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 PITPNM3Q9BZ71 974 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 SRRQ9GZT4 340 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 OR10A5Q9H207 317 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 ELOVL6Q9H5J4 265 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 CARS2Q9HA77 564 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 IL1RL2Q9HB29 575 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 APOBEC3GQ9HC16 384 aaKnown RBP6.99□□□□□ -1.29
HDAC3-216ENST00000523088 YAE1D1Q9NRH1 226 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 SEMA5BQ9P283 1151 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 PAK5Q9P286 719 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 FBXW2Q9UKT8 454 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 IKZF3Q9UKT9 509 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 PLA2G4CQ9UP65 541 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 BOLA1Q9Y3E2 137 aa6.99□□□□□ -1.29
HDAC3-216ENST00000523088 CACNA1EQ15878 2313 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 CCDC187A0A096LP49 1063 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-216ENST00000523088 A0A1B0GW15 77 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 ELOVL7A1L3X0 281 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 OOEPA6NGQ2 149 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 SGK494L7N484 410 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 EMC8O43402 210 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 OR2J2O76002 312 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 OR4F21O95013 312 aa6.98□□□□□ -1.29
HDAC3-216ENST00000523088 KLF8O95600 359 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms