RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SERPINA11Q86U17 422 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 SNX32Q86XE0 403 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 ADGRG3Q86Y34 549 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 ZZZ3Q8IYH5 903 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 LINC01560Q8TB33 94 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 RNF128Q8TEB7 428 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 TMEM234Q8WY98 164 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 ARL5BQ96KC2 179 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 PRRG4Q9BZD6 226 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 BCL2L10Q9HD36 194 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 CRIM1Q9NZV1 1036 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 A0A0G2JPF8 293 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 TMEM72A0PK05 275 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 ZC3H12DA2A288 527 aaKnown RBP15.95■□□□□ 0.14
CLK4-211ENST00000522556 CFAP73A6NFT4 308 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 A8MXE2 369 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 HNRNPCL2B2RXH8 293 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 HNRNPCL3B7ZW38 293 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 TPST1O60507 370 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 HNRNPCL1O60812 293 aaKnown RBP15.95■□□□□ 0.14
CLK4-211ENST00000522556 SYNGR4O95473 234 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 THBS1P07996 1170 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 PABPC4LP0CB38 370 aaKnown RBP15.95■□□□□ 0.14
CLK4-211ENST00000522556 HNRNPCL4P0DMR1 293 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 CPA2P48052 419 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 CDK6Q00534 326 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 TLE4Q04727 773 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 MYBPHQ13203 477 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 SCARB2Q14108 478 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 SYT14P1Q58G82 188 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 RNF220Q5VTB9 566 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 REP15Q6BDI9 236 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 OR2A2Q6IF42 318 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 GRINAQ7Z429 371 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 BBS10Q8TAM1 723 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 WFDC6Q9BQY6 131 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 STOML1Q9UBI4 398 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 OSGIN1Q9UJX0 560 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 MCTS1Q9ULC4 181 aaKnown RBP15.95■□□□□ 0.14
CLK4-211ENST00000522556 USP22Q9UPT9 525 aa15.95■□□□□ 0.14
CLK4-211ENST00000522556 NOTCH2Q04721 2471 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 ZNF814B7Z6K7 855 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 C5orf58C9J3I9 102 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 SMAD9O15198 467 aaKnown RBP15.94■□□□□ 0.14
CLK4-211ENST00000522556 SS18L1O75177 396 aaPredicted RBP15.94■□□□□ 0.14
CLK4-211ENST00000522556 GCM2O75603 506 aaPredicted RBP15.94■□□□□ 0.14
CLK4-211ENST00000522556 CRHP06850 196 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 FCGR2AP12318 317 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 PPIBP23284 216 aaKnown RBP15.94■□□□□ 0.14
CLK4-211ENST00000522556 TACR3P29371 465 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 SLC7A1P30825 629 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 RABL3Q5HYI8 236 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 ZNF311Q5JNZ3 666 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 FAM214BQ7L5A3 538 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 POU5F2Q8N7G0 328 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 ZNF610Q8N9Z0 462 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 TSPEARQ8WU66 669 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 C14orf79Q96F83 325 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 SPATA9Q9BWV2 254 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 PIGMQ9H3S5 423 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 PIF1Q9H611 641 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 TMEM38AQ9H6F2 299 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 THUMPD1Q9NXG2 353 aaKnown RBP15.94■□□□□ 0.14
CLK4-211ENST00000522556 CHRNA9Q9UGM1 479 aa15.94■□□□□ 0.14
CLK4-211ENST00000522556 ING1Q9UK53 422 aaPredicted RBP15.94■□□□□ 0.14
CLK4-211ENST00000522556 FREM1Q5H8C1 2179 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 TMED7-TICAM2A0A0A6YYA0 188 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 LOC100653049A0A140TA62 436 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 TMEM247A6NEH6 219 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 GJE1A6NN92 205 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 MRASO14807 208 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 RAMP1O60894 148 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 KRT34O76011 436 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 OPN1SWP03999 348 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 FESP07332 822 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 TFPIP10646 304 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 EDNRAP25101 427 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 AGTR1P30556 359 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 DIO1P49895 249 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 GZMMP51124 257 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 FAM27E3Q08E93 113 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 BNIP2Q12982 314 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 GNA13Q14344 377 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 LARS2Q15031 903 aaKnown RBP15.93■□□□□ 0.14
CLK4-211ENST00000522556 TRMT5Q32P41 509 aaKnown RBP15.93■□□□□ 0.14
CLK4-211ENST00000522556 PDSS1Q5T2R2 415 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 PRAMEF8Q5VWM4 474 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 PRAMEF7Q5VXH5 474 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 REEP3Q6NUK4 255 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 FCRLAQ7L513 359 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 NUFIP2Q7Z417 695 aaKnown RBP15.93■□□□□ 0.14
CLK4-211ENST00000522556 CADM2Q8N3J6 435 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 PMM1Q92871 262 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 CPNE4Q96A23 557 aaPredicted RBP15.93■□□□□ 0.14
CLK4-211ENST00000522556 GMPPAQ96IJ6 420 aaPredicted RBP15.93■□□□□ 0.14
CLK4-211ENST00000522556 PRR14Q9BWN1 585 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 FAM107BQ9H098 131 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 C12orf49Q9H741 205 aa15.93■□□□□ 0.14
CLK4-211ENST00000522556 PAQR5Q9NXK6 330 aaPredicted RBP15.93■□□□□ 0.14
CLK4-211ENST00000522556 TMED7Q9Y3B3 224 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms