RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 GPR151Q8TDV0 419 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 MYDGFQ969H8 173 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 USP47Q96K76 1375 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 C20orf173Q96LM9 149 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ZNF641Q96N77 438 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 TIMP4Q99727 224 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ATP5SQ99766 215 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 TSG101Q99816 390 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 NIPSNAP3BQ9BS92 247 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 C9orf16Q9BUW7 83 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 CSTL1Q9H114 145 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 UBE2TQ9NPD8 197 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 ZC4H2Q9NQZ6 224 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 BFARQ9NZS9 450 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 SENP1Q9P0U3 644 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 C19orf25Q9UFG5 118 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 MAN1B1Q9UKM7 699 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 DDX19BQ9UMR2 479 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 SCML2Q9UQR0 700 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 URGCP-MRPS24S4R325 110 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 A0A0A6YYD4 124 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 A0A1W2PRD5 423 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 FABP12A6NFH5 140 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 GLTPD2A6NH11 291 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 MKRN2OSH3BPM6 223 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 SIRPB1O00241 398 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 EI24O14681 340 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 AIM2O14862 343 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 TM9SF1O15321 606 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 SIGLEC5O15389 551 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 B4GALT5O43286 388 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 PPIHO43447 177 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 XRCC2O43543 280 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ERLIN2O94905 339 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 FARS2O95363 451 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 AP2A1O95782 977 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 OAS1P00973 400 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 IGHG4P01861 327 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 HLA-HP01893 362 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ALDOBP05062 364 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 WT1P19544 449 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 SYT1P21579 422 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 IDSP22304 550 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 CX3CR1P49238 355 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 RARRES1P49788 294 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 LBX1P52954 281 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 HSPA2P54652 639 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 PRPS1P60891 318 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 VBP1P61758 197 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 RPS6P62753 249 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 SARNPP82979 210 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 ZNF91Q05481 1191 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ORC2Q13416 577 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 MADCAM1Q13477 382 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 GCKRQ14397 625 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 TSC22D1Q15714 1073 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 TNXAQ16473 311 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 SLC22A6Q4U2R8 563 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 C5orf47Q569G3 176 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 SPANXN4Q5MJ08 99 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 SAMD4BQ5PRF9 694 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 MANEAQ5SRI9 462 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ATRAIDQ6UW56 229 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 Q6ZVQ6 151 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 FCRLAQ7L513 359 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ASCL5Q7RTU5 278 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 APTXQ7Z2E3 356 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 ZNF546Q86UE3 836 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 PGBD5Q8N414 524 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 JAGN1Q8N5M9 183 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 GVQW1Q8N7I0 195 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 SNX31Q8N9S9 440 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ZNF248Q8NDW4 579 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 PHOSPHO2Q8TCD6 241 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ACOT11Q8WXI4 607 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 SORCS1Q8WY21 1168 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 TADA1Q96BN2 335 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 URB1-AS1Q96HZ7 61 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 C17orf77Q96MU5 243 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 KCNA7Q96RP8 456 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 LPAR4Q99677 370 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 UCK2Q9BZX2 261 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 API5Q9BZZ5 524 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 DRC3Q9H069 523 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 C1orf198Q9H425 327 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 WDR55Q9H6Y2 383 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 SLC38A10Q9HBR0 1119 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ANKHQ9HCJ1 492 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 CLEC2DQ9UHP7 191 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 KIF25Q9UIL4 384 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ELF5Q9UKW6 265 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 AGO1Q9UL18 857 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 TSSC4Q9Y5U2 329 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 SMCHD1A6NHR9 2005 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 NSG1A0A0A6YYJ2 146 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 NPIPA5A0A0B4J1W7 369 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 NPIPA5E9PKD4 350 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 KLRC4-KLRK1H3BQV0 150 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 RAD51BO15315 384 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms