RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TM4SF4P48230 202 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 MRPL58Q14197 206 aaKnown RBP12.9□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF322Q6U7Q0 402 aaPredicted RBP12.9□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF704Q6ZNC4 412 aaPredicted RBP12.9□□□□□ -0.34
SYNPO-205ENST00000522122 OR7G1Q8NGA0 311 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 SLC22A8Q8TCC7 542 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 C16orf58Q96GQ5 468 aa12.9□□□□□ -0.34
SYNPO-205ENST00000522122 GOSR2O14653 212 aa12.9□□□□□ -0.35
SYNPO-205ENST00000522122 CSF1P09603 554 aa12.9□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF16P17020 682 aaPredicted RBP12.9□□□□□ -0.35
SYNPO-205ENST00000522122 CTBSQ01459 385 aa12.9□□□□□ -0.35
SYNPO-205ENST00000522122 RHEBQ15382 184 aa12.9□□□□□ -0.35
SYNPO-205ENST00000522122 NKPD1Q17RQ9 610 aa12.9□□□□□ -0.35
SYNPO-205ENST00000522122 Q6ZSR6 202 aa12.9□□□□□ -0.35
SYNPO-205ENST00000522122 SYNPRQ8TBG9 265 aa12.9□□□□□ -0.35
SYNPO-205ENST00000522122 RHNO1Q9BSD3 238 aa12.9□□□□□ -0.35
SYNPO-205ENST00000522122 PARPBPQ9NWS1 579 aa12.9□□□□□ -0.35
SYNPO-205ENST00000522122 KIAA0100Q14667 2235 aaKnown RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF850A8MQ14 1090 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 RAD1O60671 282 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 DNAJB6O75190 326 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 KCNJ5P48544 419 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 ELP2Q6IA86 826 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 RNF113BQ8IZP6 322 aaKnown RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 INTS14Q96SY0 518 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 LMF2Q9BU23 707 aaKnown RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 QRSL1Q9H0R6 528 aaKnown RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 EVA1AQ9H8M9 152 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 KIR2DS5A0A0G2JLQ3 304 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 A0A0G2JNG1 304 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 TVP23AA6NH52 213 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 F5H5P2 479 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 KIR2DS3K7RE56 304 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 PLATP00750 562 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 ALDOBP05062 364 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 NPPBP16860 134 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 RPS25P62851 125 aaKnown RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 TLE3Q04726 772 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 KIR2DS5Q14953 304 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 ARL6IP1Q15041 203 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 MRPL2Q5T653 305 aaKnown RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 GTPBP8Q8N3Z3 284 aaPredicted RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 LILRA3Q8N6C8 439 aaPredicted RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 WFDC5Q8TCV5 224 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF582Q96NG8 517 aaPredicted RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 EPHX3Q9H6B9 360 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 RLIMQ9NVW2 624 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 ARRDC5A6NEK1 342 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 FAM227AF5H4B4 570 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 FZD6O60353 706 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 POU3F4P49335 361 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 RGS19P49795 217 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 GLO1Q04760 184 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 SELENBP1Q13228 472 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 PDE7AQ13946 482 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 AWAT2Q6E213 333 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 FIP1L1Q6UN15 594 aaKnown RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 DIO2Q92813 273 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 C11orf54Q9H0W9 315 aaPredicted RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 SLC6A13Q9NSD5 602 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 TESQ9UGI8 421 aaKnown RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 CA3P07451 260 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 MMP12P39900 470 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 CYCSP99999 105 aaKnown RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 ASAH1Q13510 395 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 FAM69BQ5VUD6 431 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 CFAP77Q6ZQR2 320 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 STARD5Q9NSY2 213 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 RBFOX1Q9NWB1 397 aaKnown RBP12.89□□□□□ -0.35
SYNPO-205ENST00000522122 SNX11Q9Y5W9 270 aa12.89□□□□□ -0.35
SYNPO-205ENST00000522122 GFYI3L273 518 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 GPRIN2O60269 458 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 PVRP15151 417 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 SPNP16150 400 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 RPS19P39019 145 aaKnown RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 DLX5P56178 289 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 CCSMST1Q4G0I0 132 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 RAET1LQ5VY80 246 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 FAM205BPQ63HN1 556 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 KCTD20Q7Z5Y7 419 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 NANOGP1Q8N7R0 232 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 MFSD8Q8NHS3 518 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 OR2M2Q96R28 347 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 LYSMD1Q96S90 227 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 MYADMQ96S97 322 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 PHB2Q99623 299 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 NAA11Q9BSU3 229 aaPredicted RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 MFFQ9GZY8 342 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 DNMT3BQ9UBC3 853 aaKnown RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 PRSS38A1L453 326 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 IL33O95760 270 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 TDGQ13569 410 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 EIF2B1Q14232 305 aaKnown RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 RPE65Q16518 533 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 PXKQ7Z7A4 578 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 MCATQ8IVS2 390 aaKnown RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 BEST4Q8NFU0 473 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 OR5H2Q8NGV7 314 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 TM4SF18Q96CE8 201 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms