RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 MLLT11Q13015 90 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 ZNF829Q3KNS6 432 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 ZNF385CQ66K41 422 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 DESI1Q6ICB0 168 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 PLBD1Q6P4A8 553 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 CBLN3Q6UW01 205 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 PRR23CQ6ZRP0 262 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 LINC00299Q6ZSB3 139 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 ANKRD37Q7Z713 158 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 TMCO5AQ8N6Q1 288 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 C17orf47Q8NEP4 570 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 VMP1Q96GC9 406 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 MCCC2Q9HCC0 563 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 IGHV3-20A0A0C4DH32 117 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 FAM183AA6NL82 134 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 SOCS6O14544 535 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 PPM1BO75688 479 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 ONECUT2O95948 504 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 SLC6A6P31641 620 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 SOX3P41225 446 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 FHL1Q13642 323 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 SHFQ7M4L6 423 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 OVCH1Q7RTY7 1134 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 ZBTB44Q8NCP5 570 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 KBTBD8Q8NFY9 601 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 OTULINQ96BN8 352 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 OMA1Q96E52 524 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 CENPOQ9BU64 300 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 SLC19A3Q9BZV2 496 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 OCIAD1Q9NX40 245 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 EXOGQ9Y2C4 368 aaKnown RBP16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 PMF1-BGLAPU3KQ54 211 aa16.92■□□□□ 0.3
TRAPPC9-210ENST00000521667 ALOX12BO75342 701 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 PNMTP11086 282 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 ENDOUP21128 410 aaKnown RBP16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 ABCD3P28288 659 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 WNT4P56705 351 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 SOWAHCQ53LP3 525 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 CROCCP3Q8IVE0 287 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 BORCS5Q969J3 196 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 SH3GL3Q99963 347 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 SLIRPQ9GZT3 109 aaKnown RBP16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 LAT2Q9GZY6 243 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 APMAPQ9HDC9 416 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 ELOA3DA6NLF2 546 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 D6RAR5 112 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 PPP1R3DO95685 299 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 PNLIPRP2P54317 469 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 PSPHP78330 225 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 ELOA3BQ3SY89 546 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 NIPAL3Q6P499 406 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 ATG4DQ86TL0 474 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 BPHLQ86WA6 291 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 ELOA3Q8NG57 546 aa16.91■□□□□ 0.3
TRAPPC9-210ENST00000521667 FER1L5A0AVI2 2057 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 A0A1W2PQD3 144 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 SAGE2PA6NJ88 616 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 VSTM2BA6NLU5 285 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 RIIAD1A6NNX1 92 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 NTN3O00634 580 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 LIMS3P0CW19 117 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 LIMS4P0CW20 117 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 PEPDP12955 493 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 OPRL1P41146 370 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 SLC9A3P48764 834 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 MEPCEQ7L2J0 689 aaKnown RBP16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 OR4F15Q8NGB8 312 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 OR9Q1Q8NGQ5 310 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 METTL21AQ8WXB1 218 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 NACC2Q96BF6 587 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 RTN4RQ9BZR6 473 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 SEMA4CQ9C0C4 833 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 RNF167Q9H6Y7 350 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 NDUFB11Q9NX14 153 aa16.9■□□□□ 0.3
TRAPPC9-210ENST00000521667 IGKV1D-42A0A075B6H8 117 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 HTR3EA5X5Y0 456 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 ALG1L2C9J202 215 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 PRR23D1E9PI22 279 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 NDUFB2O95178 105 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 PRR23D2P0DMB1 279 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 FGF5P12034 268 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 ATP6V1E1P36543 226 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 SLC1A3P43003 542 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 SLC6A8P48029 635 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 EMP2P54851 167 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 RPS3AP61247 264 aaKnown RBP16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 RNF4P78317 190 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF117Q03924 483 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF528Q3MIS6 628 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR2G6Q5TZ20 316 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 ARHGAP11AQ6P4F7 1023 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 SLC15A4Q8N697 577 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 NFAM1Q8NET5 270 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 TP53INP1Q96A56 240 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 SH3YL1Q96HL8 342 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 MED20Q9H944 212 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 SEC14L4Q9UDX3 406 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 GPX5O75715 221 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 IGHA1P01876 353 aa16.89■□□□□ 0.29
TRAPPC9-210ENST00000521667 HK1P19367 917 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms