RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 ETV6P41212 452 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 ACAA2P42765 397 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 CDH11P55287 796 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 GFERP55789 205 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 VBP1P61758 197 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 NCS1P62166 190 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 ZNF45Q02386 682 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 GPR50Q13585 617 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 TPBGQ13641 420 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 MED22Q15528 200 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 ELAVL1Q15717 326 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 SYT16Q17RD7 645 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 DEFB133Q30KQ1 61 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 CT45A2Q5DJT8 189 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 CCNJQ5T5M9 372 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 ARHGAP11AQ6P4F7 1023 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 SMARCD3Q6STE5 483 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 NPSR1Q6W5P4 371 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 Q6ZNX1 250 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 OLIG3Q7RTU3 272 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 ARHGAP22Q7Z5H3 698 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 WDR53Q7Z5U6 358 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 RABEPKQ7Z6M1 372 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 TMEFF1Q8IYR6 380 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 GPR135Q8IZ08 494 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 SLC34A3Q8N130 599 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 AGBL5Q8NDL9 886 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 SIMC1Q8NDZ2 872 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 OR52I1Q8NGK6 324 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 OR4Q3Q8NH05 313 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 OR14A16Q8NHC5 309 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 C16orf52Q8NHV5 167 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 NDNFQ8TB73 568 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 FANK1Q8TC84 345 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 CHPT1Q8WUD6 406 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 TMEM255BQ8WV15 326 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 LIPHQ8WWY8 451 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 BPIFA2Q96DR5 249 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 MMABQ96EY8 250 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 ELF4Q99607 663 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 CDX2Q99626 313 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 MED18Q9BUE0 208 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 PLA2G12AQ9BZM1 189 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 OR52D1Q9H346 318 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 UBQLN3Q9H347 655 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 EGLN3Q9H6Z9 239 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 HHATLQ9HCP6 504 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 AMBNQ9NP70 447 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 MKKSQ9NPJ1 570 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 PRMT8Q9NR22 394 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 CMC2Q9NRP2 79 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 UBQLN4Q9NRR5 601 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 STARD5Q9NSY2 213 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 MBNL3Q9NUK0 354 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 HAO2Q9NYQ3 351 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 SELENONQ9NZV5 590 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 CNIH4Q9P003 139 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 HCN3Q9P1Z3 774 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 SERTAD3Q9UJW9 196 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 CBLCQ9ULV8 474 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 ICAM5Q9UMF0 924 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 STUB1Q9UNE7 303 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 SIGLEC7Q9Y286 467 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 SIT1Q9Y3P8 196 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 PCDHGB6Q9Y5F9 930 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 PEX16Q9Y5Y5 336 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 ADAMTS20P59510 1910 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 THADAQ6YHU6 1953 aa6.16□□□□□ -1.42
CTNNA1-228ENST00000521640 IGLV3-12A0A075B6K2 115 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 PNMA8CA0A1B0GUJ8 204 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 A0A1B0GWA3 101 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 A0A1B0GX78 115 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 ZNF670-ZNF695F2Z2N8 137 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 J3QRE1 110 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 M0R129 80 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 BHLHE40O14503 412 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 AKAP8O43823 692 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 IDH3BO43837 385 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 PTP4A3O75365 173 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 SNX4O95219 450 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 IFNGP01579 166 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 IL1AP01583 271 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 CLPSP04118 112 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 IGFBP1P08833 259 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 HBQ1P09105 142 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 PNMTP11086 282 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 IFI30P13284 250 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 APEHP13798 732 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 EPHA8P29322 1005 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 FGF9P31371 208 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 SLC6A6P31641 620 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 OPRL1P41146 370 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 GPR4P46093 362 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 SLC6A8P48029 635 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 CSNK1EP49674 416 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 MLLT10P55197 1068 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 SLC37A1P57057 533 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 ACY1Q03154 408 aa6.15□□□□□ -1.42
CTNNA1-228ENST00000521640 IKZF1Q13422 519 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms