RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 FAM173AQ9BQD7 235 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 AIF1LQ9BQI0 150 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 MS4A8Q9BY19 250 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 BHLHE41Q9C0J9 482 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 PRDM14Q9GZV8 571 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 RBM38Q9H0Z9 239 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 RHBGQ9H310 441 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 TOR3AQ9H497 397 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 NT5DC2Q9H857 520 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 LIN28AQ9H9Z2 209 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 CLK4Q9HAZ1 481 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 LANCL2Q9NS86 450 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 USE1Q9NZ43 259 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 TAC3Q9UHF0 121 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 DTX4Q9Y2E6 619 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 GMEB1Q9Y692 573 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 MED12LQ86YW9 2145 aa6.55□□□□□ -1.36
CTNNA1-227ENST00000521387 DNAH3Q8TD57 4116 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 OR2A25A4D2G3 310 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 FRG2CA6NGY1 282 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 TMEM229AB2RXF0 380 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 H7BY64 318 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 RTCAO00442 366 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 PLPP1O14494 284 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 AHCYL1O43865 530 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 LCMT2O60294 686 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ZNF354AO60765 605 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 RGS9O75916 674 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 DIRAS1O95057 198 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 HPRP00739 348 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 RPN2P04844 631 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 FESP07332 822 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ABCB1P08183 1280 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 IL3P08700 152 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ETS2P15036 469 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 PPIBP23284 216 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 GSTT1P30711 240 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 PCGF2P35227 344 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 BSGP35613 385 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 UGT2B10P36537 528 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 HSD17B2P37059 387 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 MAGEA2P43356 314 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 XCR1P46094 333 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 RNF144AP50876 292 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 MVDP53602 400 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 CRYBA2P53672 197 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 TUBA4AP68366 448 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 HBA1P69905 142 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 PHEXP78562 749 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 IL20RBQ6UXL0 311 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 R3HCC1LQ7Z5L2 792 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 VTCN1Q7Z7D3 282 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 PATL1Q86TB9 770 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ZDHHC13Q8IUH4 622 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 CSNK1A1LQ8N752 337 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 TRIML2Q8N7C3 387 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ANKRD53Q8N9V6 530 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 APCDD1LQ8NCL9 501 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 VPS37AQ8NEZ2 397 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ABHD11Q8NFV4 315 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ZFP28Q8NHY6 868 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 NEUROG1Q92886 237 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 UCN3Q969E3 161 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 POP5Q969H6 163 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 TBC1D20Q96BZ9 403 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 PPCDCQ96CD2 204 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 NMD3Q96D46 503 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 MUS81Q96NY9 551 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 PRAP1Q96NZ9 151 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 TRIB1Q96RU8 372 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 OCSTAMPQ9BR26 566 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 SOX7Q9BT81 388 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 SFXN3Q9BWM7 321 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 SPATA9Q9BWV2 254 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ZNF717Q9BY31 904 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 YTHDF1Q9BYJ9 559 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 DEFB126Q9BYW3 111 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 AICDAQ9GZX7 198 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ZNF703Q9H7S9 590 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ACKR4Q9NPB9 350 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 GPATCH2Q9NW75 528 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 FAM118AQ9NWS6 357 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 HCN3Q9P1Z3 774 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 TMEFF2Q9UIK5 374 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 RPS6KA6Q9UK32 745 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 ABCG2Q9UNQ0 655 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 SAMD4AQ9UPU9 718 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 CEPT1Q9Y6K0 416 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 COL7A1Q02388 2944 aa6.54□□□□□ -1.36
CTNNA1-227ENST00000521387 A0A087WXM4 84 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 IGKV1-8A0A0C4DH67 115 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 A0A1W2PRB8 838 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 ANKDD1BA6NHY2 528 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 LRRC3CA6NJW4 275 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 hCG_2039718K7EN88 272 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 MITFO75030 526 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 TNFRSF21O75509 655 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 CDC123O75794 336 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms