RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 TMEM160Q9NX00 188 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 POU2F3Q9UKI9 436 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 SPIN1Q9Y657 262 aaPredicted RBP13.13□□□□□ -0.31
PRKDC-204ENST00000521331 CR1P17927 2039 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 CIB4A0PJX0 185 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 ELOA3DA6NLF2 546 aaPredicted RBP13.12□□□□□ -0.31
PRKDC-204ENST00000521331 E7EQL1 145 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 SULT2B1O00204 365 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 CFLARO15519 480 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 GPRIN2O60269 458 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 PEX11AO75192 247 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 STX11O75558 287 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 CYP7B1O75881 506 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 SHBGP04278 402 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 CHRNGP07510 517 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 DHRS4L1P0CG22 281 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 SLC25A16P16260 332 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 PGCP20142 388 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 PRPS1L1P21108 318 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 SESN3P58005 492 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 IRX1P78414 480 aaPredicted RBP13.12□□□□□ -0.31
PRKDC-204ENST00000521331 VLDLRP98155 873 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 MERTKQ12866 999 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 RAB35Q15286 201 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 ZNF141Q15928 474 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 ELOA3BQ3SY89 546 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 SYT14P1Q58G82 188 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 XKR7Q5GH72 579 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 C4orf33Q8N1A6 199 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 DEPDC4Q8N2C3 294 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 UBE2J2Q8N2K1 259 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 MUC15Q8N387 334 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 ELOA3Q8NG57 546 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 OR5D16Q8NGK9 328 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 OR5AK3PQ8NH89 298 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 APH1AQ96BI3 265 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 ZHX1-C8orf76Q96EF9 292 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 ACER3Q9NUN7 267 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 LPAR3Q9UBY5 353 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 GIMAP2Q9UG22 337 aa13.12□□□□□ -0.31
PRKDC-204ENST00000521331 NOSIPQ9Y314 301 aaKnown RBP13.12□□□□□ -0.31
PRKDC-204ENST00000521331 SMIM23A6NLE4 172 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 CCT8L1PA6NM43 557 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 GPR171O14626 319 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 PHF1O43189 567 aaPredicted RBP13.11□□□□□ -0.31
PRKDC-204ENST00000521331 DNPH1O43598 174 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 RAD51DO75771 328 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 CSTAP01040 98 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 PTNP21246 168 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 CD40P25942 277 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 FKBP2P26885 142 aaKnown RBP13.11□□□□□ -0.31
PRKDC-204ENST00000521331 SOAT1P35610 550 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 ZNF83P51522 516 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 GPR68Q15743 365 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 C6orf136Q5SQH8 315 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 OR7E24Q6IFN5 339 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 ZNF544Q6NX49 715 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 EIF3MQ7L2H7 374 aaKnown RBP13.11□□□□□ -0.31
PRKDC-204ENST00000521331 FNDC5Q8NAU1 212 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 PIGXQ8TBF5 258 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 OIT3Q8WWZ8 545 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 KCNK17Q96T54 332 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 RHOXF2Q9BQY4 288 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 C1orf50Q9BV19 199 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 DUSP26Q9BV47 211 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 ASB6Q9NWX5 421 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 MKS1Q9NXB0 559 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 TAS2R16Q9NYV7 291 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 SLC25A15Q9Y619 301 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 PLCE1Q9P212 2302 aa13.11□□□□□ -0.31
PRKDC-204ENST00000521331 H7C417 338 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 DYNC1I1O14576 645 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 ANKRD28O15084 1053 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 SLU7O95391 586 aaKnown RBP13.1□□□□□ -0.31
PRKDC-204ENST00000521331 IGHV3-9P01782 118 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 CSF3P09919 207 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 UBTFL6P0CB48 400 aaPredicted RBP13.1□□□□□ -0.31
PRKDC-204ENST00000521331 TFPIP10646 304 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 BMP4P12644 408 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 MATN1P21941 496 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 APOBEC1P41238 236 aaKnown RBP13.1□□□□□ -0.31
PRKDC-204ENST00000521331 FABP6P51161 128 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 CASP9P55211 416 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 HBA1P69905 142 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 CHRNEQ04844 493 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 ARHGAP11BQ3KRB8 267 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 RIMKLAQ8IXN7 391 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 KRTCAP2Q8N6L1 136 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 EIF1ADQ8N9N8 165 aaKnown RBP13.1□□□□□ -0.31
PRKDC-204ENST00000521331 OR52N5Q8NH56 324 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 EPS8L3Q8TE67 593 aaKnown RBP13.1□□□□□ -0.31
PRKDC-204ENST00000521331 UBLCP1Q8WVY7 318 aaPredicted RBP13.1□□□□□ -0.31
PRKDC-204ENST00000521331 FAM168AQ92567 244 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 BEX2Q9BXY8 128 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 ZNF350Q9GZX5 532 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 EXD2Q9NVH0 621 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 MALT1Q9UDY8 824 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 CHRNA9Q9UGM1 479 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms