RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 SULT2B1O00204 365 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 HS3ST1O14792 307 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 SMAD9O15198 467 aaKnown RBP14.05□□□□□ -0.16
CLN8-205ENST00000520991 CYTIPO60759 359 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 FESP07332 822 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 EPHA3P29320 983 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 APOBEC1P41238 236 aaKnown RBP14.05□□□□□ -0.16
CLN8-205ENST00000520991 ANXA11P50995 505 aaKnown RBP14.05□□□□□ -0.16
CLN8-205ENST00000520991 ITGADQ13349 1161 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 TMPPEQ6ZT21 453 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 Q71RC1 249 aaPredicted RBP14.05□□□□□ -0.16
CLN8-205ENST00000520991 HMGN2P46Q86SG4 172 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 RNF130Q86XS8 419 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 ARFGAP2Q8N6H7 521 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 HSD17B8Q92506 261 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 ZNF775Q96BV0 537 aaPredicted RBP14.05□□□□□ -0.16
CLN8-205ENST00000520991 OR52E6Q96RD3 313 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 USB1Q9BQ65 265 aaKnown RBP14.05□□□□□ -0.16
CLN8-205ENST00000520991 SAP130Q9H0E3 1048 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 CXorf56Q9H5V9 222 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 THAP1Q9NVV9 213 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 CHRNA9Q9UGM1 479 aa14.05□□□□□ -0.16
CLN8-205ENST00000520991 ING1Q9UK53 422 aaPredicted RBP14.05□□□□□ -0.16
CLN8-205ENST00000520991 DSCAMO60469 2012 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 GOLGA8QA0A0J9YX86 632 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 GOLGA8OA6NCC3 632 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 ZNF814B7Z6K7 855 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 GOLGA8NF8WBI6 632 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 H7C1Q1 480 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 HMGN4O00479 90 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 HDAC3O15379 428 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 CLOCKO15516 846 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 BCAS1O75363 584 aaPredicted RBP14.04□□□□□ -0.16
CLN8-205ENST00000520991 PGRP06401 933 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 KITP10721 976 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 HOXB4P17483 251 aaPredicted RBP14.04□□□□□ -0.16
CLN8-205ENST00000520991 OR3A2P47893 321 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 PTH2RP49190 550 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 KCNJ10P78508 379 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 CHRNEQ04844 493 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 LTBQ06643 244 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 LRRC74AQ0VAA2 488 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 TAB1Q15750 504 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 NXNQ6DKJ4 435 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 ZNF621Q6ZSS3 439 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 Q6ZT83 130 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 BHLHA15Q7RTS1 189 aaPredicted RBP14.04□□□□□ -0.16
CLN8-205ENST00000520991 ZNF100Q8IYN0 542 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 ZNF611Q8N823 705 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 RAB3IL1Q8TBN0 382 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 AKAP1Q92667 903 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLN8-205ENST00000520991 ZG16BQ96DA0 208 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 ZHX1-C8orf76Q96EF9 292 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 ZNF300Q96RE9 604 aaPredicted RBP14.04□□□□□ -0.16
CLN8-205ENST00000520991 TMEM204Q9BSN7 226 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 INPP5KQ9BT40 448 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 BDH2Q9BUT1 245 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 CCDC106Q9BWC9 280 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 POTEKPQ9BYX7 375 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 GSX2Q9BZM3 304 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 ESRP2Q9H6T0 727 aaKnown RBP14.04□□□□□ -0.16
CLN8-205ENST00000520991 WDR55Q9H6Y2 383 aaPredicted RBP14.04□□□□□ -0.16
CLN8-205ENST00000520991 EXOSC3Q9NQT5 275 aaKnown RBP14.04□□□□□ -0.16
CLN8-205ENST00000520991 CTPS2Q9NRF8 586 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 EMC3Q9P0I2 261 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 PRSS50Q9UI38 385 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 LIPT1Q9Y234 373 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 RNF115Q9Y4L5 304 aa14.04□□□□□ -0.16
CLN8-205ENST00000520991 ARID1AO14497 2285 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 CLDN24A6NM45 220 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 ZNF724A8MTY0 619 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 LYZL6O75951 148 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 C1QCP02747 245 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 CD3EP07766 207 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 IL12AP29459 219 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 WDR4P57081 412 aaKnown RBP14.03□□□□□ -0.16
CLN8-205ENST00000520991 TXNL4AP83876 142 aaKnown RBP14.03□□□□□ -0.16
CLN8-205ENST00000520991 STK11Q15831 433 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 SYPL1Q16563 259 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 ATG16L1Q676U5 607 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 GRINAQ7Z429 371 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 GALNT5Q7Z7M9 940 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 ANKFN1Q8N957 763 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 PNPT1Q8TCS8 783 aaKnown RBP14.03□□□□□ -0.16
CLN8-205ENST00000520991 COX4I2Q96KJ9 171 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 TRNT1Q96Q11 434 aaKnown RBP14.03□□□□□ -0.16
CLN8-205ENST00000520991 NKIRAS1Q9NYS0 192 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 GPR45Q9Y5Y3 372 aa14.03□□□□□ -0.16
CLN8-205ENST00000520991 PRAMEF27A3QJZ7 478 aa14.02□□□□□ -0.17
CLN8-205ENST00000520991 SLCO1B7G3V0H7 640 aa14.02□□□□□ -0.17
CLN8-205ENST00000520991 SMAD7O15105 426 aaKnown RBP14.02□□□□□ -0.17
CLN8-205ENST00000520991 TMCC2O75069 709 aa14.02□□□□□ -0.17
CLN8-205ENST00000520991 SNNO75324 88 aaPredicted RBP14.02□□□□□ -0.17
CLN8-205ENST00000520991 GSNP06396 782 aa14.02□□□□□ -0.17
CLN8-205ENST00000520991 NR2F1P10589 423 aa14.02□□□□□ -0.17
CLN8-205ENST00000520991 FKBP2P26885 142 aaKnown RBP14.02□□□□□ -0.17
CLN8-205ENST00000520991 CDKN2CP42773 168 aa14.02□□□□□ -0.17
CLN8-205ENST00000520991 IDH2P48735 452 aaKnown RBP14.02□□□□□ -0.17
CLN8-205ENST00000520991 GNA13Q14344 377 aa14.02□□□□□ -0.17
CLN8-205ENST00000520991 NCMAPQ5T1S8 102 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms