RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 TRIM36Q9NQ86 728 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 RBMX2Q9Y388 322 aaKnown RBP10.47□□□□□ -0.73
CLK4-206ENST00000520878 CMAHPQ9Y471 501 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 KRT8P05787 483 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 TFPIP10646 304 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 MYL9P24844 172 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 UGT2B10P36537 528 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 FAM53BQ14153 422 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 C11orf91Q3C1V1 193 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 OTPQ5XKR4 325 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 CCBE1Q6UXH8 406 aaPredicted RBP10.47□□□□□ -0.73
CLK4-206ENST00000520878 MEPCEQ7L2J0 689 aaKnown RBP10.47□□□□□ -0.73
CLK4-206ENST00000520878 TOR1AIP2Q8NFQ8 470 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 ENKURQ8TC29 256 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 TM9SF4Q92544 642 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 TRMT61AQ96FX7 289 aaKnown RBP10.47□□□□□ -0.73
CLK4-206ENST00000520878 NUDT22Q9BRQ3 303 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 SLC22A31A6NKX4 558 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 NKX2-2O95096 273 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 MT-ND5P03915 603 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 TEKQ02763 1124 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 NXNL2Q5VZ03 156 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 FAM131CQ96AQ9 280 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 C4orf36Q96KX1 117 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 NMNAT3Q96T66 252 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 HCAR1Q9BXC0 346 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 ANKRD19PQ9H560 264 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 GRIP1Q9Y3R0 1128 aa10.47□□□□□ -0.73
CLK4-206ENST00000520878 H7C1C5 153 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 NDUFB2O95178 105 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 IGKV1D-16P01601 117 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 TP53P04637 393 aaPredicted RBP10.46□□□□□ -0.73
CLK4-206ENST00000520878 PSMB10P40306 273 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 GPR143P51810 404 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 LCN6P62502 163 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 TUBA3EQ6PEY2 450 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 NANOGNBQ7Z5D8 188 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 CEACAM19Q7Z692 300 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 SIRT6Q8N6T7 355 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 DRAXINQ8NBI3 349 aaPredicted RBP10.46□□□□□ -0.73
CLK4-206ENST00000520878 SMPDL3BQ92485 455 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 ELF4Q99607 663 aaPredicted RBP10.46□□□□□ -0.73
CLK4-206ENST00000520878 FBXO8Q9NRD0 319 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 FKBP14Q9NWM8 211 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 TMEM184BQ9Y519 407 aaPredicted RBP10.46□□□□□ -0.73
CLK4-206ENST00000520878 CHP2O43745 196 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 PIAS2O75928 621 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 LIMS3P0CW19 117 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 LIMS4P0CW20 117 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 FOLR1P15328 257 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 AQP2P41181 271 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 HSD17B7P56937 341 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 CTXN1P60606 82 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 KRR1Q13601 381 aaKnown RBP10.46□□□□□ -0.73
CLK4-206ENST00000520878 IRF3Q14653 427 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 SLC35F3Q8IY50 421 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 RNF113BQ8IZP6 322 aaKnown RBP10.46□□□□□ -0.73
CLK4-206ENST00000520878 MFSD4AQ8N468 514 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 DAZLQ92904 295 aaKnown RBP10.46□□□□□ -0.73
CLK4-206ENST00000520878 MSANTD3Q96H12 275 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 QPCTLQ9NXS2 382 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 FLRT3Q9NZU0 649 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 SATB2Q9UPW6 733 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 SLC35A3Q9Y2D2 325 aa10.46□□□□□ -0.73
CLK4-206ENST00000520878 HRO43593 1189 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 UBL4AP11441 157 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 HTR1FP30939 366 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 FASLGP48023 281 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 RAB25P57735 213 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 OR12D2P58182 307 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 FABP5Q01469 135 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 RELAQ04206 551 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 ZMAT1Q5H9K5 638 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 LEG1Q6P5S2 330 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 C16orf47Q6ZP98 133 aaPredicted RBP10.46□□□□□ -0.74
CLK4-206ENST00000520878 KRT74Q7RTS7 529 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 ATOH1Q92858 354 aaPredicted RBP10.46□□□□□ -0.74
CLK4-206ENST00000520878 TEAD3Q99594 435 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 KATNB1Q9BVA0 655 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 UBQLN4Q9NRR5 601 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 EPHA6Q9UF33 1036 aa10.46□□□□□ -0.74
CLK4-206ENST00000520878 ZNF670-ZNF695F2Z2N8 137 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 RFPL3O75679 317 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 EDNRAP25101 427 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 MRPS15P82914 257 aaKnown RBP10.45□□□□□ -0.74
CLK4-206ENST00000520878 CEBPEQ15744 281 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 PLK5Q496M5 336 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 MZT2AQ6P582 158 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 ZNF613Q6PF04 617 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 CBLN3Q6UW01 205 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 IL20RBQ6UXL0 311 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 CD300LDQ6UXZ3 194 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 RASD2Q96D21 266 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 PSD2Q9BQI7 771 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 KCNN2Q9H2S1 579 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 MEPEQ9NQ76 525 aaPredicted RBP10.45□□□□□ -0.74
CLK4-206ENST00000520878 RPRD1BQ9NQG5 326 aaKnown RBP10.45□□□□□ -0.74
CLK4-206ENST00000520878 BABAM2Q9NXR7 383 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 SDK2Q58EX2 2172 aa10.45□□□□□ -0.74
CLK4-206ENST00000520878 A8MV72 311 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms