RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ZNF675Q8TD23 568 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 BCAS4Q8TDM0 211 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TRPC4APQ8TEL6 797 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 DOK4Q8TEW6 326 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 HTRA1Q92743 480 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ZBTB8AQ96BR9 441 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 NXNL1Q96CM4 212 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 CERS2Q96G23 380 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 FOXN4Q96NZ1 517 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 RBM14Q96PK6 669 aaKnown RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 UQCC2Q9BRT2 126 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TMEM79Q9BSE2 394 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 CENPOQ9BU64 300 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 SORBS1Q9BX66 1292 aaKnown RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ZNF717Q9BY31 904 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 DERL2Q9GZP9 239 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 RAB1BQ9H0U4 201 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 SLITRK2Q9H156 845 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 MRPL46Q9H2W6 279 aaKnown RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 NTN4Q9HB63 628 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 FAM120CQ9NX05 1096 aaKnown RBP4.29□□□□□ -1.72
SDCBP-207ENST00000520168 TAS2R9Q9NYW1 312 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 AHSPQ9NZD4 102 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 MAT2BQ9NZL9 334 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 KLHL9Q9P2J3 617 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 ADAM29Q9UKF5 820 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 IKZF3Q9UKT9 509 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 GRID1Q9ULK0 1009 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 PRELID1Q9Y255 219 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 PTGDR2Q9Y5Y4 395 aa4.29□□□□□ -1.72
SDCBP-207ENST00000520168 B4DXG7 233 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 H0YIV9 168 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 NDUFAB1O14561 156 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 TNFSF11O14788 317 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PGRMC2O15173 223 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 TAPBPO15533 448 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SCO2O43819 266 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 CXCL13O43927 109 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 TMPRSS11DO60235 418 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 FADS1O60427 444 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 CCNT2O60583 730 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PRAMEF4O60810 478 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 KERAO60938 352 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SH3BGRLO75368 114 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 EEDO75530 441 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 LYZL6O75951 148 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SLITRK5O94991 958 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 IL33O95760 270 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 CBX7O95931 251 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 FAM107AO95990 144 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 BCL10O95999 233 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PAHP00439 452 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 RPSAP08865 295 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 GSTA2P09210 222 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 DDX5P17844 614 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PTNP21246 168 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 ELK4P28324 431 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PRKAR1BP31321 381 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PHBP35232 272 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 EIF1P41567 113 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 OR3A2P47893 321 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 HSPA7P48741 367 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PPOXP50336 477 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SLC18A1P54219 525 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 CARD18P57730 90 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 GPX6P59796 221 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 ATP6V0D1P61421 351 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 IL13RA1P78552 427 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 RASGEF1BQ0VAM2 473 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 MGAT2Q10469 447 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 DDX39BQ13838 428 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 EXOSC7Q15024 291 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 TSC22D1Q15714 1073 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 CARTPTQ16568 116 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 ZNF239Q16600 458 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 DECR1Q16698 335 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 RNASEH2BQ5TBB1 312 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PRAMEF9Q5VWM5 478 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 OR7E24Q6IFN5 339 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SLC48A1Q6P1K1 146 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 FCRLAQ7L513 359 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 TRABD2AQ86V40 505 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SPATA24Q86W54 205 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 TUSC5Q8IXB3 177 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PDIK1LQ8N165 341 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 FAM110BQ8TC76 370 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 ACTRT2Q8TDY3 377 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PYROXD1Q8WU10 500 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 NEU4Q8WWR8 484 aaPredicted RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 TMEM186Q96B77 213 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 LRRC39Q96DD0 335 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SIGLEC10Q96LC7 697 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SORCS2Q96PQ0 1159 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 FANCD2OSQ96PS1 177 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 CCT8L2Q96SF2 557 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 MTERF1Q99551 399 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SERPINI1Q99574 410 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SOX7Q9BT81 388 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 OSBPL10Q9BXB5 764 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms