RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PHF11Q9UIL8 331 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 SNX6Q9UNH7 406 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 CLSPNQ9HAW4 1339 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 PNPLA6Q8IY17 1366 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 ZNF318Q5VUA4 2279 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 FAM231BA6NCW3 169 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 HELTA6NFD8 242 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 ZNF264O43296 627 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 HCRTR1O43613 425 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 IGHG4P01861 327 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 DRD3P35462 400 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 P2RY1P47900 373 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 BEND3Q5T5X7 828 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 TTC23Q5W5X9 447 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 ATL3Q6DD88 541 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 CCDC50Q8IVM0 306 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 TMEM252Q8N6L7 170 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 ANKFN1Q8N957 763 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 OR5L2Q8NGL0 311 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 PAQR8Q8TEZ7 354 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 C7orf33Q8WU49 177 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 TGM7Q96PF1 710 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 CCNL2Q96S94 520 aaPredicted RBP3.1□□□□□ -1.91
SQLE-202ENST00000518604 EBF4Q9BQW3 602 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 APMAPQ9HDC9 416 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 SIGLEC8Q9NYZ4 499 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 C6orf203Q9P0P8 240 aaPredicted RBP3.1□□□□□ -1.91
SQLE-202ENST00000518604 PCSK1NQ9UHG2 260 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 LCMT1Q9UIC8 334 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 BTNL2Q9UIR0 455 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 NAP1L2Q9ULW6 460 aaPredicted RBP3.1□□□□□ -1.91
SQLE-202ENST00000518604 MRPS33Q9Y291 106 aaKnown RBP3.1□□□□□ -1.91
SQLE-202ENST00000518604 IFT52Q9Y366 437 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 SLCO1B1Q9Y6L6 691 aa3.1□□□□□ -1.91
SQLE-202ENST00000518604 ZNF646O15015 1829 aaPredicted RBP3.09□□□□□ -1.91
SQLE-202ENST00000518604 K7EQM0 130 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 CXCL13O43927 109 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 UGT2B4P06133 528 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 IQCF3P0C7M6 154 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 IMPDH1P20839 514 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 UQCRC2P22695 453 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 PAX7P23759 505 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 ANXA13P27216 316 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 FGF9P31371 208 aaPredicted RBP3.09□□□□□ -1.91
SQLE-202ENST00000518604 UGT1A5P35504 534 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 DAP3P51398 398 aaKnown RBP3.09□□□□□ -1.91
SQLE-202ENST00000518604 TIMM10P62072 90 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 GNB2P62879 340 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 RIPK1Q13546 671 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 CUL1Q13616 776 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 IL17AQ16552 155 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 SLC25A52Q3SY17 297 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 ATAD3BQ5T9A4 648 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 ACOT7LQ6ZUV0 252 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 VRK2Q86Y07 508 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 TGIF2LYQ8IUE0 185 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 SLC38A6Q8IZM9 456 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 OR4D5Q8NGN0 318 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 OR1F12Q8NHA8 337 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 HTR3CQ8WXA8 447 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 EMG1Q92979 244 aaKnown RBP3.09□□□□□ -1.91
SQLE-202ENST00000518604 EFHD2Q96C19 240 aaPredicted RBP3.09□□□□□ -1.91
SQLE-202ENST00000518604 PELI1Q96FA3 418 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 ZNF607Q96SK3 696 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 ARHGDIGQ99819 225 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 MAGT1Q9H0U3 335 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 SLC17A5Q9NRA2 495 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 AATFQ9NY61 560 aaKnown RBP eCLIP3.09□□□□□ -1.91
SQLE-202ENST00000518604 PIPOXQ9P0Z9 390 aa3.09□□□□□ -1.91
SQLE-202ENST00000518604 AK6Q9Y3D8 172 aaKnown RBP3.09□□□□□ -1.91
SQLE-202ENST00000518604 OR10H3O60404 316 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 LGALS2P05162 132 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 HPNP05981 417 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 PNMTP11086 282 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 COX5AP20674 150 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 HSPA2P54652 639 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 TRIM16LQ309B1 348 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 TP53I3Q53FA7 332 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 KLF17Q5JT82 389 aaPredicted RBP3.08□□□□□ -1.92
SQLE-202ENST00000518604 CFAP157Q5JU67 520 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 C11orf71Q6IPW1 123 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 OR4D9Q8NGE8 314 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 SLC35E1Q96K37 410 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 PGLYRP4Q96LB8 373 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 GAL3ST1Q99999 423 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 KLHDC3Q9BQ90 382 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 ERP44Q9BS26 406 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 EDEM2Q9BV94 578 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 SPATA16Q9BXB7 569 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 SELENOIQ9C0D9 397 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 OR51J1Q9H342 316 aa3.08□□□□□ -1.92
SQLE-202ENST00000518604 F5H6K3 240 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 KIF2AO00139 706 aaPredicted RBP3.07□□□□□ -1.92
SQLE-202ENST00000518604 GMFGO60234 142 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 SCGNO76038 276 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 HSMCR30P0CW71 290 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 POLR2EP19388 210 aaKnown RBP3.07□□□□□ -1.92
SQLE-202ENST00000518604 HNF1AP20823 631 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 MMP11P24347 488 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms