RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 PRAMEF27A3QJZ7 478 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 SULT2B1O00204 365 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 POLR3GO15318 223 aaPredicted RBP16.53■□□□□ 0.24
HOXA3-203ENST00000518451 TFPIP10646 304 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 PSMB1P20618 241 aaKnown RBP16.53■□□□□ 0.24
HOXA3-203ENST00000518451 CCKARP32238 428 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 CRATP43155 626 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 MAP2K6P52564 334 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 ZSWIM7Q19AV6 140 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 SYT14P1Q58G82 188 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 MAVSQ7Z434 540 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 PNPT1Q8TCS8 783 aaKnown RBP16.53■□□□□ 0.24
HOXA3-203ENST00000518451 WDR60Q8WVS4 1066 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 ZNF524Q96C55 264 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 MARK4Q96L34 752 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 BCO1Q9HAY6 547 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 CACYBPQ9HB71 228 aaKnown RBP16.53■□□□□ 0.24
HOXA3-203ENST00000518451 ARGLU1Q9NWB6 273 aaPredicted RBP16.53■□□□□ 0.24
HOXA3-203ENST00000518451 BEX4Q9NWD9 120 aaPredicted RBP16.53■□□□□ 0.24
HOXA3-203ENST00000518451 P2RX2Q9UBL9 471 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 CHRNA9Q9UGM1 479 aa16.53■□□□□ 0.24
HOXA3-203ENST00000518451 TEP1Q99973 2627 aaKnown RBP16.53■□□□□ 0.24
HOXA3-203ENST00000518451 DEFB108AA8MXU0 73 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 CYTIPO60759 359 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 CHRM4P08173 479 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 CD99P14209 185 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 FPR1P21462 350 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 IDH2P48735 452 aaKnown RBP16.52■□□□□ 0.24
HOXA3-203ENST00000518451 DIO1P49895 249 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 RASGEF1BQ0VAM2 473 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 P2RY6Q15077 328 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 BEX5Q5H9J7 111 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 COX20Q5RI15 118 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 C6orf10Q5SRN2 563 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 HDXQ7Z353 690 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 MTDHQ86UE4 582 aaKnown RBP16.52■□□□□ 0.24
HOXA3-203ENST00000518451 TGIF2LYQ8IUE0 185 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 ZNF440Q8IYI8 595 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 PIGTQ969N2 578 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 CCDC106Q9BWC9 280 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 RAD21L1Q9H4I0 556 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 ARMC7Q9H6L4 198 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 TPT1P8Q9HAU6 139 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 TCF7L2Q9NQB0 619 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 ZNF232Q9UNY5 417 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 HDGFL3Q9Y3E1 203 aa16.52■□□□□ 0.24
HOXA3-203ENST00000518451 AKAP9Q99996 3911 aa16.52■□□□□ 0.23
HOXA3-203ENST00000518451 ABCA4P78363 2273 aa16.52■□□□□ 0.23
HOXA3-203ENST00000518451 AKAP6Q13023 2319 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 ZNF724A8MTY0 619 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 DNPH1O43598 174 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 CRISP3P54108 245 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 NR1H2P55055 460 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 IRX1P78414 480 aaPredicted RBP16.51■□□□□ 0.23
HOXA3-203ENST00000518451 TFAP2EQ6VUC0 442 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 NUFIP2Q7Z417 695 aaKnown RBP16.51■□□□□ 0.23
HOXA3-203ENST00000518451 CNOT9Q92600 299 aaKnown RBP16.51■□□□□ 0.23
HOXA3-203ENST00000518451 PSD2Q9BQI7 771 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 ACTR6Q9GZN1 396 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 NGBQ9NPG2 151 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 CTPS2Q9NRF8 586 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 EMC3Q9P0I2 261 aa16.51■□□□□ 0.23
HOXA3-203ENST00000518451 IGHV3-15A0A0B4J1V0 119 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 CFAP73A6NFT4 308 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 CLDN24A6NM45 220 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 HMGB1P1B2RPK0 211 aaPredicted RBP16.5■□□□□ 0.23
HOXA3-203ENST00000518451 FAAHO00519 579 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 PMS2P2O95744 297 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 C1QCP02747 245 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 CD53P19397 219 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 SLC1A3P43003 542 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 MRPL19P49406 292 aaKnown RBP16.5■□□□□ 0.23
HOXA3-203ENST00000518451 DSTNP60981 165 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 PDK3Q15120 406 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 ACKR1Q16570 336 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 DNAJC14Q6Y2X3 702 aaPredicted RBP16.5■□□□□ 0.23
HOXA3-203ENST00000518451 GALNT5Q7Z7M9 940 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 HMGN2P46Q86SG4 172 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 ADGRG3Q86Y34 549 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 GABRG1Q8N1C3 465 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 OR52P1PQ8NH57 321 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 VPS33AQ96AX1 596 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 DDIT4LQ96D03 193 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 CCDC28BQ9BUN5 200 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 VIPAS39Q9H9C1 493 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 TMEM45AQ9NWC5 275 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 TRAPPC4Q9Y296 219 aa16.5■□□□□ 0.23
HOXA3-203ENST00000518451 HRNRQ86YZ3 2850 aaPredicted RBP16.49■□□□□ 0.23
HOXA3-203ENST00000518451 A0A0G2JPF8 293 aa16.49■□□□□ 0.23
HOXA3-203ENST00000518451 A0A1W2PPR1 153 aa16.49■□□□□ 0.23
HOXA3-203ENST00000518451 HNRNPCL2B2RXH8 293 aa16.49■□□□□ 0.23
HOXA3-203ENST00000518451 HNRNPCL3B7ZW38 293 aa16.49■□□□□ 0.23
HOXA3-203ENST00000518451 SMAD9O15198 467 aaKnown RBP16.49■□□□□ 0.23
HOXA3-203ENST00000518451 SIAH2O43255 324 aa16.49■□□□□ 0.23
HOXA3-203ENST00000518451 ZNF208O43345 1280 aa16.49■□□□□ 0.23
HOXA3-203ENST00000518451 HNRNPCL1O60812 293 aaKnown RBP16.49■□□□□ 0.23
HOXA3-203ENST00000518451 CNOT4O95628 575 aaKnown RBP16.49■□□□□ 0.23
HOXA3-203ENST00000518451 TFPTP0C1Z6 253 aa16.49■□□□□ 0.23
HOXA3-203ENST00000518451 HNRNPCL4P0DMR1 293 aa16.49■□□□□ 0.23
HOXA3-203ENST00000518451 ETFAP13804 333 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms