RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 AGBL2Q5U5Z8 902 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 C9orf135Q5VTT2 229 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 HHATQ5VTY9 493 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 LIPNQ5VXI9 398 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 KLHL17Q6TDP4 642 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ZYG11AQ6WRX3 759 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 TRIM46Q7Z4K8 759 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 MTERF4Q7Z6M4 381 aaKnown RBP6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 P2RY8Q86VZ1 359 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 LSRQ86X29 649 aaPredicted RBP6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 DEPDC4Q8N2C3 294 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 TMCO5AQ8N6Q1 288 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 TCP10LQ8TDR4 215 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 FBXO17Q96EF6 278 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 FAM120BQ96EK7 910 aaKnown RBP6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 L3HYPDHQ96EM0 354 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 APOPT1Q96IL0 206 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 TSSK3Q96PN8 268 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 INPP5KQ9BT40 448 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 PRR14Q9BWN1 585 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 PIGUQ9H490 435 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 REEP4Q9H6H4 257 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 MKS1Q9NXB0 559 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 NKIRAS1Q9NYS0 192 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 NTMQ9P121 344 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 TRAF6Q9Y4K3 522 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 CCL27Q9Y4X3 112 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 KCNE3Q9Y6H6 103 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 PMF1-BGLAPU3KQ54 211 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ARFGEF3Q5TH69 2177 aa6.13□□□□□ -1.43
SCARNA11.1-201ENST00000516918 NPIPB8E9PQR5 432 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 SULT2B1O00204 365 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 HSPA4LO95757 839 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 PROCP04070 461 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 FGF4P08620 206 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 TFPIP10646 304 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 HNF1AP20823 631 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 NTF4P34130 210 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 SERPINB5P36952 375 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 NR4A2P43354 598 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 DIO1P49895 249 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ATP12AP54707 1039 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 MAGOHP61326 146 aaKnown RBP6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 CHRNB3Q05901 458 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 SQLEQ14534 574 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 MLC1Q15049 377 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 CR1LQ2VPA4 569 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 SVEP1Q4LDE5 3571 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 HSP90B2PQ58FF3 399 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 EXOSC6Q5RKV6 272 aaKnown RBP6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 DCST2Q5T1A1 773 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 LIPMQ5VYY2 423 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 FBXW9Q5XUX1 488 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 CLEC6AQ6EIG7 209 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ZNF544Q6NX49 715 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ZCCHC12Q6PEW1 402 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 SSX8Q7RTT4 187 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 WDR31Q8NA23 367 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ZNF527Q8NB42 609 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 TOR1AIP2Q8NFQ8 470 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 OR52E4Q8NGH9 312 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 OR5W2Q8NH69 310 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ADAMTS15Q8TE58 950 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 APH1AQ96BI3 265 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 MRGPRX4Q96LA9 322 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 FOXN4Q96NZ1 517 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 PAIP2Q9BPZ3 127 aaKnown RBP6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 PIMREGQ9BSJ6 248 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 TRMOQ9BU70 441 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 PLA2G12AQ9BZM1 189 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 HOXD1Q9GZZ0 328 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 C12orf65Q9H3J6 166 aaKnown RBP6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 DUSP22Q9NRW4 184 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 SIRT3Q9NTG7 399 aaPredicted RBP6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ACSS1Q9NUB1 689 aaPredicted RBP6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ZCCHC3Q9NUD5 404 aaKnown RBP6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 C1orf109Q9NX04 203 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 NOSIPQ9Y314 301 aaKnown RBP6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 FIS1Q9Y3D6 152 aa6.12□□□□□ -1.43
SCARNA11.1-201ENST00000516918 MGAM2Q2M2H8 2515 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 IGKV3D-15A0A087WSY6 115 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 LRP5LA4QPB2 252 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 HMGB1P1B2RPK0 211 aaPredicted RBP6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 VWC2LB2RUY7 222 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ATP6V1G2-DDX39BF2Z307 99 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 SLC28A1O00337 649 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ZNF264O43296 627 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 TYROBPO43914 113 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 TBX19O60806 448 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 CHEK2O96017 543 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 PGRP06401 933 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 BPGMP07738 259 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ITGA5P08648 1049 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 LINC00032P0C843 101 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 UROSP10746 265 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 UBL4AP11441 157 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 BMP4P12644 408 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 ITGA2P17301 1181 aa6.11□□□□□ -1.43
SCARNA11.1-201ENST00000516918 SDC1P18827 310 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms