RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 TWISTNBQ3B726 338 aaPredicted RBP-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 BOLA3Q53S33 107 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 PVRIGQ6DKI7 326 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 ITPRIPL1Q6GPH6 555 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 STRADAQ7RTN6 431 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 CHCHD4Q8N4Q1 142 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 OR4F15Q8NGB8 312 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 OR6M1Q8NGM8 313 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 OCC1Q8TAD7 63 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 ACTRT1Q8TDG2 376 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 HEXDCQ8WVB3 486 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 SLC5A11Q8WWX8 675 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 CXorf58Q96LI9 332 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 C20orf166-AS1Q96NR2 134 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 RAB34Q9BZG1 259 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 KLHL4Q9C0H6 718 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 PDE7BQ9NP56 450 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 STARD5Q9NSY2 213 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 PAK1IP1Q9NWT1 392 aaPredicted RBP-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 SMPD3Q9NY59 655 aaPredicted RBP-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 APPL1Q9UKG1 709 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 HMCN2Q8NDA2 5059 aa-1.28□□□□□ -2.61
SNORA40.13-201ENST00000516379 BDP1A6H8Y1 2624 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 TRGV4A0A0C4DH28 118 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 TRBC2A0A5B9 178 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 ZNF716A6NP11 495 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 H0YHG0 523 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 XPO1O14980 1071 aaKnown RBP-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 TM9SF1O15321 606 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 AQP9O43315 295 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 MBTPS2O43462 519 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 CTAG2O75638 210 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 PSMD10O75832 226 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 JCHAINP01591 159 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 ASGR1P07306 291 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 MSR1P21757 451 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 EMP2P54851 167 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 ARF3P61204 181 aaPredicted RBP-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 ARF1P84077 181 aaKnown RBP-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 REG3AQ06141 175 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 KCTD11Q693B1 232 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 RTL6Q6ICC9 239 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 HACD2Q6Y1H2 254 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 TMPPEQ6ZT21 453 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 DNAJB7Q7Z6W7 309 aaPredicted RBP-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 CCDC54Q8NEL0 328 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 CIRBP-AS1Q8TBR5 109 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 PGLYRP4Q96LB8 373 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 ACCSQ96QU6 501 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 INPP5KQ9BT40 448 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 IDI2Q9BXS1 227 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 ROGDIQ9GZN7 287 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 ZDHHC6Q9H6R6 413 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 RNPEPL1Q9HAU8 725 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 SNX7Q9UNH6 387 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 FOXJ3Q9UPW0 622 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 TRPV2Q9Y5S1 764 aa-1.29□□□□□ -2.62
SNORA40.13-201ENST00000516379 IGKV1-9A0A0C4DH69 117 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 DIAPH2O60879 1101 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 GLCEO94923 617 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 GNA14O95837 355 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 ZDHHC11BP0C7U3 371 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 CSH1P0DML2 217 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 CSH2P0DML3 217 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 PRPS2P11908 318 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 EPHX2P34913 555 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 KLK7P49862 253 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 DLX1P56177 255 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 SELENOTP62341 195 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 FOLH1Q04609 750 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 SLC10A7Q0GE19 358 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 CCDC173Q0VFZ6 552 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 IFT88Q13099 833 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 GUCA2BQ16661 112 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 CDC42EP5Q6NZY7 148 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 TMEM182Q6ZP80 229 aaPredicted RBP-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 NRMQ8IXM6 262 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 PI4KAP1Q8N8J0 262 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 IPMKQ8NFU5 416 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 OR9A2Q8NGT5 310 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 BRSK1Q8TDC3 778 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 TRUB1Q8WWH5 349 aaKnown RBP-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 EVI5LQ96CN4 794 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 RMDN1Q96DB5 314 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 ZNF382Q96SR6 550 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 DDX50Q9BQ39 737 aaKnown RBP-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 KLHDC3Q9BQ90 382 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 ZSCAN5AQ9BUG6 496 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 DEFB127Q9H1M4 99 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 VPS37BQ9H9H4 285 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 PPCSQ9HAB8 311 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 TM9SF3Q9HD45 589 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 DCAF13Q9NV06 445 aaKnown RBP-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 LUZP4Q9P127 313 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 CPSF2Q9P2I0 782 aaKnown RBP-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 IL20RAQ9UHF4 553 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 TEKT2Q9UIF3 430 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 PLA2G4CQ9UP65 541 aa-1.3□□□□□ -2.62
SNORA40.13-201ENST00000516379 PTPRUQ92729 1446 aa-1.31□□□□□ -2.62
SNORA40.13-201ENST00000516379 NAPSAO96009 420 aa-1.31□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms