RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 PDE5AO76074 875 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 WNT11O96014 354 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 MSMBP08118 114 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 ALOX5P09917 674 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 ATP6V1C1P21283 382 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 HSD17B3P37058 310 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 SLC1A3P43003 542 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 CSNK2A1P68400 391 aaPredicted RBP9.11□□□□□ -0.95
CLDND1-231ENST00000515620 POU6F2P78424 691 aaPredicted RBP9.11□□□□□ -0.95
CLDND1-231ENST00000515620 IL1RL1Q01638 556 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 CLCQ05315 142 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 PDK3Q15120 406 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 QPRTQ15274 297 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 TIGD2Q4W5G0 525 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 HIKESHIQ53FT3 197 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 SLC25A53Q5H9E4 307 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLDND1-231ENST00000515620 ANKRD26P1Q6NSI1 321 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 MTDHQ86UE4 582 aaKnown RBP9.11□□□□□ -0.95
CLDND1-231ENST00000515620 CIDECQ96AQ7 238 aaPredicted RBP9.11□□□□□ -0.95
CLDND1-231ENST00000515620 GIMAP5Q96F15 307 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 C16orf58Q96GQ5 468 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 LRRC37BQ96QE4 947 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 ZNF382Q96SR6 550 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 SLC6A7Q99884 636 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 BTBD2Q9BX70 525 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 SUCNR1Q9BXA5 334 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 ESM1Q9NQ30 184 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 UPB1Q9UBR1 384 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 ZNF281Q9Y2X9 895 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 POLR3HQ9Y535 204 aaPredicted RBP9.11□□□□□ -0.95
CLDND1-231ENST00000515620 HEATR1Q9H583 2144 aaKnown RBP9.11□□□□□ -0.95
CLDND1-231ENST00000515620 VWFP04275 2813 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 NOTCH1P46531 2555 aa9.11□□□□□ -0.95
CLDND1-231ENST00000515620 LOC105371242A0A075B767 164 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 SH3PXD2BA1X283 911 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 HSPA4LO95757 839 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 CRYAAP02489 173 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 ARAFP10398 606 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 TFPIP10646 304 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 TCP1P17987 556 aaKnown RBP9.1□□□□□ -0.95
CLDND1-231ENST00000515620 CDH2P19022 906 aaPredicted RBP9.1□□□□□ -0.95
CLDND1-231ENST00000515620 UBA52P62987 128 aaKnown RBP9.1□□□□□ -0.95
CLDND1-231ENST00000515620 TGFBR3Q03167 851 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 FOXL1Q12952 345 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 ADRM1Q16186 407 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 TSNAXIP1Q2TAA8 658 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 KLHL26Q53HC5 615 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 SYT14P1Q58G82 188 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 CDC73Q6P1J9 531 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 FAHD2BQ6P2I3 314 aaPredicted RBP9.1□□□□□ -0.95
CLDND1-231ENST00000515620 TMPPEQ6ZT21 453 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 OR51F2Q8NH61 342 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 CLDND2Q8NHS1 167 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 ZFP28Q8NHY6 868 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 PIGXQ8TBF5 258 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 UBASH3BQ8TF42 649 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 CDS1Q92903 461 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 RNF166Q96A37 237 aaPredicted RBP9.1□□□□□ -0.95
CLDND1-231ENST00000515620 ARL8AQ96BM9 186 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 ZHX1-C8orf76Q96EF9 292 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 FAHD2AQ96GK7 314 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 SLC38A2Q96QD8 506 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 KCNA7Q96RP8 456 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 KATNB1Q9BVA0 655 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 C1QTNF3Q9BXJ4 246 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 CDC42EP4Q9H3Q1 356 aaKnown RBP9.1□□□□□ -0.95
CLDND1-231ENST00000515620 DYNLRB1Q9NP97 96 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 SLC7A10Q9NS82 523 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 SIRT5Q9NXA8 310 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 TIMM22Q9Y584 194 aa9.1□□□□□ -0.95
CLDND1-231ENST00000515620 SUPT7LO94864 414 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 PNPP00491 289 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 UBL4AP11441 157 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 ZFP36P26651 326 aaKnown RBP9.09□□□□□ -0.95
CLDND1-231ENST00000515620 MAGEA4P43358 317 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 KHKP50053 298 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 SLC16A1P53985 500 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 MERTKQ12866 999 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 CBFBQ13951 182 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 TSPO2Q5TGU0 170 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 C1orf229Q6ZS94 237 aaPredicted RBP9.09□□□□□ -0.95
CLDND1-231ENST00000515620 CARM1Q86X55 608 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 GAS2L3Q86XJ1 694 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 CCDC103Q8IW40 242 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 LRRC8AQ8IWT6 810 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 ZDHHC22Q8N966 263 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 OR5W2Q8NH69 310 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 MRPL57Q9BQC6 102 aaKnown RBP9.09□□□□□ -0.95
CLDND1-231ENST00000515620 MRPL46Q9H2W6 279 aaKnown RBP9.09□□□□□ -0.95
CLDND1-231ENST00000515620 TPK1Q9H3S4 243 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 SERINC1Q9NRX5 453 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 TREM2Q9NZC2 230 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 GRHL1Q9NZI5 618 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 ARMCX1Q9P291 453 aa9.09□□□□□ -0.95
CLDND1-231ENST00000515620 FBXO9Q9UK97 447 aaPredicted RBP9.09□□□□□ -0.95
CLDND1-231ENST00000515620 PRKDCP78527 4128 aaKnown RBP9.08□□□□□ -0.96
CLDND1-231ENST00000515620 ESPNB1AK53 854 aa9.08□□□□□ -0.96
CLDND1-231ENST00000515620 CCDC188H7C350 402 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms