RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 ZNF426Q9BUY5 554 aa10.85□□□□□ -0.67
PDLIM5-220ENST00000514830 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
PDLIM5-220ENST00000514830 DKKL1Q9UK85 242 aa10.85□□□□□ -0.67
PDLIM5-220ENST00000514830 FAM32AQ9Y421 112 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-220ENST00000514830 AP4S1Q9Y587 144 aa10.85□□□□□ -0.67
PDLIM5-220ENST00000514830 V9GYQ6 96 aa10.85□□□□□ -0.67
PDLIM5-220ENST00000514830 ZNF407Q9C0G0 2248 aa10.85□□□□□ -0.67
PDLIM5-220ENST00000514830 DNAJC13O75165 2243 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 A0A1W2PRQ8 180 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 HTR3EA5X5Y0 456 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 ADAMDEC1O15204 470 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 ZNF208O43345 1280 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 SUSD5O60279 629 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 KRT36O76013 467 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 IGF2P01344 180 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 HK1P19367 917 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 RBM34P42696 430 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 MAGEA5P43359 124 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 POLR2HP52434 150 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 GFRA1P56159 465 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 SMIM11AP58511 58 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 ELF3P78545 371 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 HOXC5Q00444 222 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 ST3GAL3Q11203 375 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 DGCR6Q14129 220 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 SLC10A1Q14973 349 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 CMPK2Q5EBM0 449 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 C5orf46Q6UWT4 87 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 DEF8Q6ZN54 512 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 PRICKLE2Q7Z3G6 844 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 ATG4DQ86TL0 474 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 POC1BQ8TC44 478 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 PIGQQ9BRB3 760 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 FUZQ9BT04 418 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 MAN2C1Q9NTJ4 1040 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 RPS6KB2Q9UBS0 482 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 RIMS3Q9UJD0 308 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 OSGIN1Q9UJX0 560 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 AURKCQ9UQB9 309 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 BSNQ9UPA5 3926 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 KIAA1549Q9HCM3 1950 aa10.84□□□□□ -0.67
PDLIM5-220ENST00000514830 A0A087WUJ7 227 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 OR2M5A3KFT3 312 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 CPSF4LA6NMK7 179 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 FAM166BA8MTA8 275 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 H3BNX3 289 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 hCG_2039718K7EN88 272 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 TFECO14948 347 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 FZD7O75084 574 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 DEAF1O75398 565 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 ACTL6AO96019 429 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 THY1P04216 161 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 TACR3P29371 465 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 LIMS1P48059 325 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 CLK1P49759 484 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 CDH12P55289 794 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 TAS2R41P59536 307 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 PMP22Q01453 160 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 ALDH6A1Q02252 535 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 FOXF1Q12946 379 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 SELENBP1Q13228 472 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 PIN1Q13526 163 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 LY6DQ14210 128 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 TRAM2Q15035 370 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 BCL2A1Q16548 175 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 KRTCAP3Q53RY4 240 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 ALG10BQ5I7T1 473 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 OR2T5Q6IEZ7 315 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 FAM180AQ6UWF9 173 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 GDF7Q7Z4P5 450 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 ADGRG3Q86Y34 549 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 OR2T29Q8NH02 315 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 OR14L1PQ8NHC6 308 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 NEIL3Q8TAT5 605 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 SLC25A43Q8WUT9 341 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 SLC41A3Q96GZ6 507 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 HS6ST2Q96MM7 605 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 PRSS27Q9BQR3 290 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 TMEM43Q9BTV4 400 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 PRR14Q9BWN1 585 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 SLC19A3Q9BZV2 496 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 NMNAT1Q9HAN9 279 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 S100A14Q9HCY8 104 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 AGPAT4Q9NRZ5 378 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 DNAJB9Q9UBS3 223 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 VDAC3Q9Y277 283 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 NTNG1Q9Y2I2 539 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 AP4B1Q9Y6B7 739 aa10.83□□□□□ -0.68
PDLIM5-220ENST00000514830 TMED7-TICAM2A0A0A6YYA0 188 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 J3KTA2 159 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 CLOCKO15516 846 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 EFNA2O43921 213 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 NPIPB7O75200 414 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 TRAPPC6AO75865 159 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 CST1P01037 141 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 H1F0P07305 194 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 RFC3P40938 356 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 RAC1P63000 192 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 MERTKQ12866 999 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms