RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 OR52I1Q8NGK6 324 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 OR4D5Q8NGN0 318 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 C7orf34Q96L11 122 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 SENP8Q96LD8 212 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 IMMP1LQ96LU5 166 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 ZNF670Q9BS34 389 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 SLC35A5Q9BS91 424 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 SPATA16Q9BXB7 569 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 CD274Q9NZQ7 290 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 RNF14Q9UBS8 474 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 PCSK1NQ9UHG2 260 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 LCMT1Q9UIC8 334 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 LRP5LA4QPB2 252 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 PANO1I0J062 215 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 ECI2O75521 394 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 ACTL6AO96019 429 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 LALBAP00709 142 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 FUT3P21217 361 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 LAP3P28838 519 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 CAV2P51636 162 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 BIDP55957 195 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 TAF7Q15545 349 aaPredicted RBP3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 TRIM16LQ309B1 348 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 GPRC6AQ5T6X5 926 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 CCDC137Q6PK04 289 aaKnown RBP3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 ZNF100Q8IYN0 542 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 TMEM123Q8N131 208 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 Q8N7P7 452 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 ATP6V0D2Q8N8Y2 350 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 SETD7Q8WTS6 366 aaKnown RBP3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 PGLYRP4Q96LB8 373 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 NIPSNAP3BQ9BS92 247 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 MAGT1Q9H0U3 335 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 NYAP2Q9P242 653 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 DCDC2Q9UHG0 476 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 MEMO1Q9Y316 297 aa3.5□□□□□ -1.85
HMGCS1-207ENST00000514610 METTL21EPA6NDL7 271 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 ZNF861PO60384 105 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 TPST2O60704 377 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 MMP23AO75900 390 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 IGHG4P01861 327 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 FGF9P31371 208 aaPredicted RBP3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 PTGDSP41222 190 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 CHRNB3Q05901 458 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 CCDC173Q0VFZ6 552 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 TPGS2Q68CL5 300 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 ACOT7LQ6ZUV0 252 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 ARCQ7LC44 396 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 ZNF683Q8IZ20 524 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 CLEC4FQ8N1N0 589 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 OR2L13Q8N349 312 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 OR9A1PQ8NGU1 263 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 ANKRD49Q8WVL7 239 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 CHCHD10Q8WYQ3 142 aaPredicted RBP3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 OR1E3Q8WZA6 343 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 TGM7Q96PF1 710 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 GAL3ST1Q99999 423 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 ZSCAN5AQ9BUG6 496 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 AATFQ9NY61 560 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 PIPOXQ9P0Z9 390 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 TBK1Q9UHD2 729 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 PHF11Q9UIL8 331 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 SNX6Q9UNH7 406 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 IFT52Q9Y366 437 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 UGT2A1Q9Y4X1 527 aa3.49□□□□□ -1.85
HMGCS1-207ENST00000514610 A0A0J9YXY3 114 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 E7ESA3 106 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 CXCL13O43927 109 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 KRT6AP02538 564 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 RBMY1CP0DJD4 496 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 DAP3P51398 398 aaKnown RBP3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 PSG7Q13046 419 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 C2orf83Q53S99 150 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 EOGTQ5NDL2 527 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 CCDC71LQ8N9Z2 235 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 OR2AP1Q8NGE2 309 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 TCTEX1D2Q8WW35 142 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 PIGCQ92535 297 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 DCUN1D4Q92564 292 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 RAPGEF5Q92565 580 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 EMG1Q92979 244 aaKnown RBP3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 CCNL2Q96S94 520 aaPredicted RBP3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 ARHGDIGQ99819 225 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 POLR1EQ9GZS1 481 aaKnown RBP3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 SMYD3Q9H7B4 428 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 ZDHHC11Q9H8X9 412 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 POPDC2Q9HBU9 364 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 KDRP35968 1356 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 THSD7BQ9C0I4 1608 aa3.48□□□□□ -1.85
HMGCS1-207ENST00000514610 ARHGAP23Q9P227 1491 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 TTC21BQ7Z4L5 1316 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 IGKV1D-8A0A087WSZ0 117 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 A0A1B0GUS0 222 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 ARPC3O15145 178 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 HCRTR1O43613 425 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 OR10H3O60404 316 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 SUPT7LO94864 414 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 IGLV1-47P01700 117 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 PNMTP11086 282 aa3.47□□□□□ -1.85
HMGCS1-207ENST00000514610 PCMT1P22061 227 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms