RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 MFN2O95140 757 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 RCBTB2O95199 551 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 FAM107AO95990 144 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 UQCRBP14927 111 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 CCNA2P20248 432 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 PRKAR1BP31321 381 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 PCGF2P35227 344 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 APOBEC1P41238 236 aaKnown RBP12.53□□□□□ -0.4
USP46-209ENST00000514536 ZNF136P52737 540 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 DLX5P56178 289 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 CARD18P57730 90 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 HOXC5Q00444 222 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 DMTNQ08495 405 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 PON3Q15166 354 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 PDSS1Q5T2R2 415 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 PPP4R4Q6NUP7 873 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 DHRS4L2Q6PKH6 230 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 GRINAQ7Z429 371 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 ARMC8Q8IUR7 673 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 FNDC9Q8TBE3 224 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 LRRC37BQ96QE4 947 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 GPATCH1Q9BRR8 931 aaKnown RBP12.53□□□□□ -0.4
USP46-209ENST00000514536 CMTM6Q9NX76 183 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 HEATR5AQ86XA9 2040 aa12.53□□□□□ -0.4
USP46-209ENST00000514536 SPTAN1Q13813 2472 aaKnown RBP12.53□□□□□ -0.4
USP46-209ENST00000514536 NCOA6Q14686 2063 aaPredicted RBP12.53□□□□□ -0.4
USP46-209ENST00000514536 A0A1W2PNR3 127 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 PRORSD1PA6NEY8 169 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 CCT8L1PA6NM43 557 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 SHOX2O60902 331 aaPredicted RBP12.52□□□□□ -0.4
USP46-209ENST00000514536 DCTN3O75935 186 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 TMIGD3P0DMS9 266 aaPredicted RBP12.52□□□□□ -0.4
USP46-209ENST00000514536 CTSSP25774 331 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 GRNP28799 593 aaKnown RBP12.52□□□□□ -0.4
USP46-209ENST00000514536 TACR3P29371 465 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 SLC1A3P43003 542 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 NUDT2P50583 147 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 PCBP3P57721 371 aaKnown RBP12.52□□□□□ -0.4
USP46-209ENST00000514536 FOXF2Q12947 444 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 GLIPR1L2Q4G1C9 344 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 GKAP1Q5VSY0 366 aaPredicted RBP12.52□□□□□ -0.4
USP46-209ENST00000514536 SP5Q6BEB4 398 aaPredicted RBP12.52□□□□□ -0.4
USP46-209ENST00000514536 COMTD1Q86VU5 262 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 LSRQ86X29 649 aaPredicted RBP12.52□□□□□ -0.4
USP46-209ENST00000514536 ADGRG3Q86Y34 549 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 SLC30A8Q8IWU4 369 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 SLC15A3Q8IY34 581 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 GCNT2Q8N0V5 402 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 CADM2Q8N3J6 435 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 ANKS4BQ8N8V4 417 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 SMYD1Q8NB12 490 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 PHF3Q92576 2039 aaKnown RBP12.52□□□□□ -0.4
USP46-209ENST00000514536 HOPXQ9BPY8 73 aaPredicted RBP12.52□□□□□ -0.4
USP46-209ENST00000514536 PRRG4Q9BZD6 226 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 KCNJ16Q9NPI9 418 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 OSGIN1Q9UJX0 560 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 KLF2Q9Y5W3 355 aaPredicted RBP12.52□□□□□ -0.4
USP46-209ENST00000514536 ICE1Q9Y2F5 2266 aa12.52□□□□□ -0.4
USP46-209ENST00000514536 TMED7-TICAM2A0A0A6YYA0 188 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 AQP8O94778 261 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 SYNGR4O95473 234 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 OPN1SWP03999 348 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 TFPIP10646 304 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 BMP5P22003 454 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 SLC7A1P30825 629 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 HTR3AP46098 478 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 CPA2P48052 419 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 COPZ1P61923 177 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 INTS11Q5TA45 600 aaKnown RBP12.52□□□□□ -0.41
USP46-209ENST00000514536 C3orf33Q6P1S2 294 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 HACD2Q6Y1H2 254 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 ARPINQ7Z6K5 226 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 PATL1Q86TB9 770 aaKnown RBP12.52□□□□□ -0.41
USP46-209ENST00000514536 REXO5Q96IC2 774 aaKnown RBP12.52□□□□□ -0.41
USP46-209ENST00000514536 ZFP3Q96NJ6 502 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 ADAM19Q9H013 955 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 ARL8BQ9NVJ2 186 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 PAQR5Q9NXK6 330 aaPredicted RBP12.52□□□□□ -0.41
USP46-209ENST00000514536 TMED7Q9Y3B3 224 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 ZNF175Q9Y473 711 aa12.52□□□□□ -0.41
USP46-209ENST00000514536 NBPF19A0A087WUL8 3843 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 KIAA1549Q9HCM3 1950 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 DVL2O14641 736 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 POLR2HP52434 150 aaKnown RBP12.51□□□□□ -0.41
USP46-209ENST00000514536 SLC7A2P52569 658 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 DUSP7Q16829 419 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 WBP2NLQ6ICG8 309 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 C8orf82Q6P1X6 216 aaPredicted RBP12.51□□□□□ -0.41
USP46-209ENST00000514536 ERICH5Q6P6B1 374 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 CCDC197Q8NCU1 140 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 BHLHE22Q8NFJ8 381 aaPredicted RBP12.51□□□□□ -0.41
USP46-209ENST00000514536 OR2T12Q8NG77 320 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 SLC26A7Q8TE54 656 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 ROBO4Q8WZ75 1007 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 SLC35B4Q969S0 331 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 DNAJA3Q96EY1 480 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 OR5B2Q96R09 309 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 PRR14Q9BWN1 585 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 SRXN1Q9BYN0 137 aa12.51□□□□□ -0.41
USP46-209ENST00000514536 COQ10BQ9H8M1 238 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms