RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 HNRNPA1P09651 372 aaKnown RBP eCLIP12.17□□□□□ -0.46
PRDM16-208ENST00000514189 CLUP10909 449 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 BTN1A1Q13410 526 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 YOD1Q5VVQ6 348 aaPredicted RBP12.17□□□□□ -0.46
PRDM16-208ENST00000514189 AFMIDQ63HM1 303 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 OR5K2Q8NHB8 316 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 ZFPM2Q8WW38 1151 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 NEURL2Q9BR09 285 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 PELI2Q9HAT8 420 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 TMEFF2Q9UIK5 374 aaPredicted RBP12.17□□□□□ -0.46
PRDM16-208ENST00000514189 CPNE6O95741 557 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 SEMA4FO95754 770 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 CRYZL1O95825 349 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 IFNA21P01568 189 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 DCNP07585 359 aaKnown RBP12.17□□□□□ -0.46
PRDM16-208ENST00000514189 ARSBP15848 533 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 SPNP16150 400 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 CTF1Q16619 201 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 GGTA1PQ4G0N0 100 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 OR13C5Q8NGS8 318 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 TOMM40LQ969M1 308 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 HHATLQ9HCP6 504 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 FAM155AB1AL88 458 aaPredicted RBP12.17□□□□□ -0.46
PRDM16-208ENST00000514189 PEX12O00623 359 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 HSPA12AO43301 675 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 RAB3DO95716 219 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 HNRNPFP52597 415 aaKnown RBP12.17□□□□□ -0.46
PRDM16-208ENST00000514189 RIDAP52758 137 aaKnown RBP12.17□□□□□ -0.46
PRDM16-208ENST00000514189 CSNK1G2P78368 415 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 RPE65Q16518 533 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 PLK5Q496M5 336 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 BBS1Q8NFJ9 593 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 OR13C3Q8NGS6 347 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 MFFQ9GZY8 342 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 NXF5Q9H1B4 397 aaKnown RBP12.17□□□□□ -0.46
PRDM16-208ENST00000514189 UBQLN3Q9H347 655 aa12.17□□□□□ -0.46
PRDM16-208ENST00000514189 FER1L6Q2WGJ9 1857 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 CDHR4A6H8M9 788 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ZNF208O43345 1280 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 RFPL3O75679 317 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ABLIM3O94929 683 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 CCR2P41597 374 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ACTA2P62736 377 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ACTG2P63267 376 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ZNF616Q08AN1 781 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ELOAQ14241 798 aaKnown RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 INSL4Q14641 139 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 BAK1Q16611 211 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 C12orf40Q86WS4 652 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ZNF619Q8N2I2 560 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 DUSP19Q8WTR2 217 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 DVL3Q92997 716 aaPredicted RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 RNF32Q9H0A6 362 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 RBM38Q9H0Z9 239 aaKnown RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 SEMA4GQ9NTN9 838 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ZNF226Q9NYT6 803 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 CA14Q9ULX7 337 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 COPS3Q9UNS2 423 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ZNF443Q9Y2A4 671 aaPredicted RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ZFC3H1O60293 1989 aaKnown RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 TRIP12Q14669 1992 aaPredicted RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 CCDC163A0A0D9SF12 145 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 HTR3BO95264 441 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 RPS5P46782 204 aaKnown RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 CXADRP78310 365 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 TDGQ13569 410 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 EOGTQ5NDL2 527 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 XAF1Q6GPH4 301 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 CCL4L1Q8NHW4 92 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 CNOT9Q92600 299 aaKnown RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 NXPE2Q96DL1 559 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 HIST1H2AAQ96QV6 131 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 NOX3Q9HBY0 568 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 RBFOX1Q9NWB1 397 aaKnown RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 GPR34Q9UPC5 381 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 MED16Q9Y2X0 877 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 AP1M2Q9Y6Q5 423 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 POM121BA6NF01 834 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 F5H5K5 113 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 FOXE1O00358 373 aaPredicted RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 CASC3O15234 703 aaKnown RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 HEXBP07686 556 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 BCL6P41182 706 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 OR4M1Q8NGD0 313 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 GIMAP1Q8WWP7 306 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 NKX3-1Q99801 234 aaPredicted RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 PRSS16Q9NQE7 514 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 A0A0A6YYH2 397 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 A6NJ64 397 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 GFYI3L273 518 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 POLR1CO15160 346 aaPredicted RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 AKR7A2O43488 359 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 SSX4O60224 188 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 ZNF41P51814 821 aaPredicted RBP12.16□□□□□ -0.46
PRDM16-208ENST00000514189 FAAP20Q6NZ36 180 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 PFN4Q8NHR9 129 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 LGALS14Q8TCE9 139 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 DIO2Q92813 273 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 NEURL3Q96EH8 262 aa12.16□□□□□ -0.46
PRDM16-208ENST00000514189 CHST8Q9H2A9 424 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms