RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ENDOUP21128 410 aaKnown RBP13.68□□□□□ -0.22
VCAN-211ENST00000513984 MPLP40238 635 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 ETV5P41161 510 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 SLC9A3P48764 834 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 CLK1P49759 484 aaKnown RBP13.68□□□□□ -0.22
VCAN-211ENST00000513984 ETV1P50549 477 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 RNF4P78317 190 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 FOXK2Q01167 660 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 DCTN2Q13561 401 aaKnown RBP13.68□□□□□ -0.22
VCAN-211ENST00000513984 C1DQ13901 141 aaKnown RBP13.68□□□□□ -0.22
VCAN-211ENST00000513984 SSX1Q16384 188 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 LPAL2Q16609 132 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 DESI1Q6ICB0 168 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 PAQR6Q6TCH4 344 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 RTL4Q6ZR62 310 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 ATG4DQ86TL0 474 aaPredicted RBP13.68□□□□□ -0.22
VCAN-211ENST00000513984 CPOQ8IVL8 374 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 BBS1Q8NFJ9 593 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 OR51A7Q8NH64 312 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 METTL21AQ8WXB1 218 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 ZHX1-C8orf76Q96EF9 292 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 SGTBQ96EQ0 304 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 SPSB2Q99619 263 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 IFT27Q9BW83 186 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 EXOGQ9Y2C4 368 aaKnown RBP13.68□□□□□ -0.22
VCAN-211ENST00000513984 GNB5O14775 395 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 FOXD2O60548 495 aaPredicted RBP13.67□□□□□ -0.22
VCAN-211ENST00000513984 CPNE3O75131 537 aaKnown RBP13.67□□□□□ -0.22
VCAN-211ENST00000513984 SLC6A6P31641 620 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 SLC6A8P48029 635 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 EMP2P54851 167 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 ZNF117Q03924 483 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 MLLT11Q13015 90 aaPredicted RBP13.67□□□□□ -0.22
VCAN-211ENST00000513984 MOGQ16653 247 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 DGUOKQ16854 277 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 TIMM50Q3ZCQ8 353 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 NIPAL3Q6P499 406 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 LINC00299Q6ZSB3 139 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 TMCO5AQ8N6Q1 288 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 AGBL5Q8NDL9 886 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 TNFRSF13CQ96RJ3 184 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 WDR77Q9BQA1 342 aaPredicted RBP13.67□□□□□ -0.22
VCAN-211ENST00000513984 TMEM43Q9BTV4 400 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 RTN4RQ9BZR6 473 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 SMOC1Q9H4F8 434 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 OSGIN1Q9UJX0 560 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 IGKV1D-42A0A075B6H8 117 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 ELOA3DA6NLF2 546 aaPredicted RBP13.67□□□□□ -0.22
VCAN-211ENST00000513984 MEN1O00255 615 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 EIF4E2O60573 245 aaKnown RBP13.67□□□□□ -0.22
VCAN-211ENST00000513984 GP1BAP07359 652 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 MST1P26927 711 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 TGFBR1P36897 503 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 GRK6P43250 576 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 ENTPD1P49961 510 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 CCR4P51679 360 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 TUBA1BP68363 451 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.67□□□□□ -0.22
VCAN-211ENST00000513984 ELOA3BQ3SY89 546 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 LCN10Q6JVE6 187 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 MRPL14Q6P1L8 145 aaKnown RBP13.67□□□□□ -0.22
VCAN-211ENST00000513984 DBX2Q6ZNG2 339 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 TUBA1AQ71U36 451 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 ELOA3Q8NG57 546 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 NUBPLQ8TB37 319 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 JAM3Q9BX67 310 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 OR51E2Q9H255 320 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 DCSTAMPQ9H295 470 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 C12orf10Q9HB07 376 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 ZBTB20Q9HC78 741 aaPredicted RBP13.67□□□□□ -0.22
VCAN-211ENST00000513984 CHCHD3Q9NX63 227 aaKnown RBP13.67□□□□□ -0.22
VCAN-211ENST00000513984 H2AFY2Q9P0M6 372 aaPredicted RBP13.67□□□□□ -0.22
VCAN-211ENST00000513984 PCDHGB2Q9Y5G2 931 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 BDP1A6H8Y1 2624 aa13.67□□□□□ -0.22
VCAN-211ENST00000513984 CPAMD8Q8IZJ3 1885 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.66□□□□□ -0.22
VCAN-211ENST00000513984 OR6C70A6NIJ9 312 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 FAM183AA6NL82 134 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 SOCS6O14544 535 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 OR7A10O76100 309 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 NDUFB2O95178 105 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 APOL3O95236 402 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 IGHA1P01876 353 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 PEPDP12955 493 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 ACP1P24666 158 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 WNT4P56705 351 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 ZNF362Q5T0B9 420 aaPredicted RBP13.66□□□□□ -0.22
VCAN-211ENST00000513984 SLC35F1Q5T1Q4 408 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 ARMC4Q5T2S8 1044 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 PLBD1Q6P4A8 553 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 ARHGAP11AQ6P4F7 1023 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 PAPD4Q6PIY7 484 aaKnown RBP13.66□□□□□ -0.22
VCAN-211ENST00000513984 TMEM205Q6UW68 189 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 USP43Q70EL4 1123 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 KMT2EQ8IZD2 1858 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 VMP1Q96GC9 406 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 LOXL4Q96JB6 756 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 CTRCQ99895 268 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 MESP1Q9BRJ9 268 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 PLGRKTQ9HBL7 147 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms