RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 IL1RL1Q01638 556 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 CLCQ05315 142 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 PDK3Q15120 406 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 QPRTQ15274 297 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 TIGD2Q4W5G0 525 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 HIKESHIQ53FT3 197 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 SLC25A53Q5H9E4 307 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLDND1-227ENST00000513452 ANKRD26P1Q6NSI1 321 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 MTDHQ86UE4 582 aaKnown RBP9.11□□□□□ -0.95
CLDND1-227ENST00000513452 CIDECQ96AQ7 238 aaPredicted RBP9.11□□□□□ -0.95
CLDND1-227ENST00000513452 GIMAP5Q96F15 307 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 C16orf58Q96GQ5 468 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 LRRC37BQ96QE4 947 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 ZNF382Q96SR6 550 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 SLC6A7Q99884 636 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 BTBD2Q9BX70 525 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 SUCNR1Q9BXA5 334 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 ESM1Q9NQ30 184 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 UPB1Q9UBR1 384 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 ZNF281Q9Y2X9 895 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 POLR3HQ9Y535 204 aaPredicted RBP9.11□□□□□ -0.95
CLDND1-227ENST00000513452 HEATR1Q9H583 2144 aaKnown RBP9.11□□□□□ -0.95
CLDND1-227ENST00000513452 VWFP04275 2813 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 NOTCH1P46531 2555 aa9.11□□□□□ -0.95
CLDND1-227ENST00000513452 LOC105371242A0A075B767 164 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 SH3PXD2BA1X283 911 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 HSPA4LO95757 839 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 CRYAAP02489 173 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 ARAFP10398 606 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 TFPIP10646 304 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 TCP1P17987 556 aaKnown RBP9.1□□□□□ -0.95
CLDND1-227ENST00000513452 CDH2P19022 906 aaPredicted RBP9.1□□□□□ -0.95
CLDND1-227ENST00000513452 UBA52P62987 128 aaKnown RBP9.1□□□□□ -0.95
CLDND1-227ENST00000513452 TGFBR3Q03167 851 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 FOXL1Q12952 345 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 ADRM1Q16186 407 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 TSNAXIP1Q2TAA8 658 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 KLHL26Q53HC5 615 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 SYT14P1Q58G82 188 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 CDC73Q6P1J9 531 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 FAHD2BQ6P2I3 314 aaPredicted RBP9.1□□□□□ -0.95
CLDND1-227ENST00000513452 TMPPEQ6ZT21 453 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 OR51F2Q8NH61 342 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 CLDND2Q8NHS1 167 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 ZFP28Q8NHY6 868 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 PIGXQ8TBF5 258 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 UBASH3BQ8TF42 649 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 CDS1Q92903 461 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 ARL8AQ96BM9 186 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 ZHX1-C8orf76Q96EF9 292 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 FAHD2AQ96GK7 314 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 SLC38A2Q96QD8 506 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 KCNA7Q96RP8 456 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 KATNB1Q9BVA0 655 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 C1QTNF3Q9BXJ4 246 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 CDC42EP4Q9H3Q1 356 aaKnown RBP9.1□□□□□ -0.95
CLDND1-227ENST00000513452 DYNLRB1Q9NP97 96 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 SLC7A10Q9NS82 523 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 SIRT5Q9NXA8 310 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 TIMM22Q9Y584 194 aa9.1□□□□□ -0.95
CLDND1-227ENST00000513452 SUPT7LO94864 414 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 PNPP00491 289 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 UBL4AP11441 157 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 ZFP36P26651 326 aaKnown RBP9.09□□□□□ -0.95
CLDND1-227ENST00000513452 MAGEA4P43358 317 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 KHKP50053 298 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 SLC16A1P53985 500 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 MERTKQ12866 999 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 CBFBQ13951 182 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 TSPO2Q5TGU0 170 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 C1orf229Q6ZS94 237 aaPredicted RBP9.09□□□□□ -0.95
CLDND1-227ENST00000513452 CARM1Q86X55 608 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 GAS2L3Q86XJ1 694 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 CCDC103Q8IW40 242 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 LRRC8AQ8IWT6 810 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 ZDHHC22Q8N966 263 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 OR5W2Q8NH69 310 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 MRPL57Q9BQC6 102 aaKnown RBP9.09□□□□□ -0.95
CLDND1-227ENST00000513452 MRPL46Q9H2W6 279 aaKnown RBP9.09□□□□□ -0.95
CLDND1-227ENST00000513452 TPK1Q9H3S4 243 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 SERINC1Q9NRX5 453 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 TREM2Q9NZC2 230 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 GRHL1Q9NZI5 618 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 ARMCX1Q9P291 453 aa9.09□□□□□ -0.95
CLDND1-227ENST00000513452 FBXO9Q9UK97 447 aaPredicted RBP9.09□□□□□ -0.95
CLDND1-227ENST00000513452 PRKDCP78527 4128 aaKnown RBP9.08□□□□□ -0.96
CLDND1-227ENST00000513452 ESPNB1AK53 854 aa9.08□□□□□ -0.96
CLDND1-227ENST00000513452 CCDC188H7C350 402 aa9.08□□□□□ -0.96
CLDND1-227ENST00000513452 ETV2O00321 342 aaPredicted RBP9.08□□□□□ -0.96
CLDND1-227ENST00000513452 ZNF264O43296 627 aa9.08□□□□□ -0.96
CLDND1-227ENST00000513452 AVPP01185 164 aa9.08□□□□□ -0.96
CLDND1-227ENST00000513452 TFP02787 698 aa9.08□□□□□ -0.96
CLDND1-227ENST00000513452 ADRA2AP08913 450 aa9.08□□□□□ -0.96
CLDND1-227ENST00000513452 SBK3P0C264 359 aa9.08□□□□□ -0.96
CLDND1-227ENST00000513452 CECR9P0C854 216 aa9.08□□□□□ -0.96
CLDND1-227ENST00000513452 HKR1P10072 659 aa9.08□□□□□ -0.96
CLDND1-227ENST00000513452 SAGP10523 405 aaPredicted RBP9.08□□□□□ -0.96
CLDND1-227ENST00000513452 EFNA1P20827 205 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms