RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 NAXDQ8IW45 347 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 BBS5Q8N3I7 341 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 OR2A12Q8NGT7 310 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 FBXO25Q8TCJ0 367 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 CXorf40AQ8TE69 158 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 CTNNBL1Q8WYA6 563 aaPredicted RBP3.5□□□□□ -1.85
HTT-210ENST00000512909 HIST1H2ACQ93077 130 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 MRPL24Q96A35 216 aaKnown RBP3.5□□□□□ -1.85
HTT-210ENST00000512909 CCDC42Q96M95 316 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 VGLL1Q99990 258 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 CABLES2Q9BTV7 478 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 WRAP53Q9BUR4 548 aaKnown RBP3.5□□□□□ -1.85
HTT-210ENST00000512909 NTMT1Q9BV86 223 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 SLC17A9Q9BYT1 436 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 SLC26A1Q9H2B4 701 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 SYNDIG1Q9H7V2 258 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 FAM212BQ9NTI7 297 aaPredicted RBP3.5□□□□□ -1.85
HTT-210ENST00000512909 AIPL1Q9NZN9 384 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 MRPS18CQ9Y3D5 142 aaKnown RBP3.5□□□□□ -1.85
HTT-210ENST00000512909 PRUNE2Q8WUY3 3088 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 BDP1A6H8Y1 2624 aa3.5□□□□□ -1.85
HTT-210ENST00000512909 ZNF638Q14966 1978 aaKnown RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 A0A0C4DFX4 3053 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 DOCK8Q8NF50 2099 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 TRGV8A0A0C4DH27 118 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 ATP6AP2A0A1C7CYW4 349 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 C5orf51A6NDU8 294 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 A8MU76 341 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 DFNA5O60443 496 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 TM7SF2O76062 418 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 GAS8-AS1O95177 125 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 CPNE6O95741 557 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 MT-ND3P03897 115 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 IGHV4-34P06331 123 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 PTMAP06454 111 aaKnown RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 CTSLP07711 333 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 APRTP07741 180 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 ABHD2P08910 425 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 H2AFZP0C0S5 128 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 GZMAP12544 262 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 ADRB3P13945 408 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 CTSEP14091 401 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 B4GALT1P15291 398 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 CSRP1P21291 193 aaKnown RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 SPRP35270 261 aaPredicted RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 CCNHP51946 323 aaPredicted RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 CDH6P55285 790 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 YBEYP58557 167 aaPredicted RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 HILS1P60008 231 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 HERV-K104P63124 156 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 RPS21P63220 83 aaKnown RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 OGDHQ02218 1023 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 BCL2L1Q07817 233 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 C17orf67Q0P5P2 114 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 C1orf61Q13536 156 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 EIF4EBP2Q13542 120 aaPredicted RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 PDE7AQ13946 482 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 PIGHQ14442 188 aaPredicted RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 ZNF146Q15072 292 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 CYTH1Q15438 398 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 GPAT3Q53EU6 434 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 BOLA3Q53S33 107 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 LIPJQ5W064 366 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 SEL1L3Q68CR1 1132 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 C22orf39Q6P5X5 142 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 Q6ZSR6 202 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 TMUB2Q71RG4 321 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 H2AFVQ71UI9 128 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 ARCQ7LC44 396 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 MARCH9Q86YJ5 346 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 ZNF440Q8IYI8 595 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 SAMD12Q8N8I0 201 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 DCAF4L2Q8NA75 395 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 ZNF485Q8NCK3 441 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 OR2AP1Q8NGE2 309 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 OR8K1Q8NGG5 319 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 RDH11Q8TC12 318 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 CHPT1Q8WUD6 406 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 NT5C3BQ969T7 300 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 ZNF597Q96LX8 424 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 NSMCE2Q96MF7 247 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 ATP6V0BQ99437 205 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 SNRNP25Q9BV90 132 aaKnown RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 HSD3B7Q9H2F3 369 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 HEXA-AS1Q9H8Q6 139 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 JPT2Q9H910 190 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 DEPPQ9NTK1 212 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 DDX28Q9NUL7 540 aaKnown RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 TMEM181Q9P2C4 612 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 ANAPC7Q9UJX3 599 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 ENTPD4Q9Y227 616 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 MRPS2Q9Y399 296 aaKnown RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 OR51B4Q9Y5P0 310 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 SLCO1B1Q9Y6L6 691 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 KIF26AQ9ULI4 1882 aaPredicted RBP3.49□□□□□ -1.85
HTT-210ENST00000512909 PATJQ8NI35 1801 aa3.49□□□□□ -1.85
HTT-210ENST00000512909 MIA3Q5JRA6 1907 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 TTC28Q96AY4 2481 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 EYSQ5T1H1 3165 aa3.48□□□□□ -1.85
HTT-210ENST00000512909 UNC80Q8N2C7 3258 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms