RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PTAFRP25105 342 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 THBS2P35442 1172 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 ACVR1BP36896 505 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 APOBEC1P41238 236 aaKnown RBP11.12□□□□□ -0.63
VEGFA-216ENST00000512683 SLC1A6P48664 564 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 MAP2K6P52564 334 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 MAD2L1Q13257 205 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-216ENST00000512683 QPRTQ15274 297 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 ZNF141Q15928 474 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 PGS1Q32NB8 556 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 SPDYE7PQ495Y7 208 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 CEP85LQ5SZL2 805 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.12□□□□□ -0.63
VEGFA-216ENST00000512683 ALKBH2Q6NS38 261 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 KLHL17Q6TDP4 642 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 SEZ6L2Q6UXD5 910 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 TMEM108Q6UXF1 575 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 MTDHQ86UE4 582 aaKnown RBP11.12□□□□□ -0.63
VEGFA-216ENST00000512683 CLECL1Q8IZS7 167 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 DEPDC4Q8N2C3 294 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 OR10H5Q8NGA6 315 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 OR5AK3PQ8NH89 298 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 ZNF75CPQ92670 426 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-216ENST00000512683 SERHL2Q9H4I8 314 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 POLE3Q9NRF9 147 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 ACER3Q9NUN7 267 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 TMEM160Q9NX00 188 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 SONP18583 2426 aaKnown RBP11.11□□□□□ -0.63
VEGFA-216ENST00000512683 NPIPA5A0A0B4J1W7 369 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 ESPNB1AK53 854 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 NPIPA7E9PJI5 369 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 CFLARO15519 480 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 SCN2BO60939 215 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 STX11O75558 287 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 IGHV4-39P01824 125 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 MYZAPP0CAP1 466 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 NPIPA8P0DM63 369 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 PAX7P23759 505 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 RPL14P50914 215 aaKnown RBP11.11□□□□□ -0.63
VEGFA-216ENST00000512683 PHC1P78364 1004 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 TOMM34Q15785 309 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-216ENST00000512683 TIGD2Q4W5G0 525 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 FBXW9Q5XUX1 488 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 OR4F3Q6IEY1 312 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 OR7E24Q6IFN5 339 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 EIF3MQ7L2H7 374 aaKnown RBP11.11□□□□□ -0.63
VEGFA-216ENST00000512683 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.11□□□□□ -0.63
VEGFA-216ENST00000512683 ZNF100Q8IYN0 542 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 ZNF524Q96C55 264 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 ZHX1-C8orf76Q96EF9 292 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 OR7D2Q96RA2 312 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 CENPHQ9H3R5 247 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 EXD2Q9NVH0 621 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 HDGFL3Q9Y3E1 203 aa11.11□□□□□ -0.63
VEGFA-216ENST00000512683 PRR14LQ5THK1 2151 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 RAI1Q7Z5J4 1906 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 ELOA3DA6NLF2 546 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 SHISA9B4DS77 424 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 RNASET2O00584 256 aaKnown RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 SMAD9O15198 467 aaKnown RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 SNUPNO95149 360 aaKnown RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 TTKP33981 857 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 CDKN1AP38936 164 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 RNF144AP50876 292 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 WDR4P57081 412 aaKnown RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 SESN3P58005 492 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 RPS26P62854 115 aaKnown RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 LOXL1Q08397 574 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 STX3Q13277 289 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 RAB35Q15286 201 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 TSC22D1Q15714 1073 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 ARHGAP11BQ3KRB8 267 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 ELOA3BQ3SY89 546 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 CHRFAM7AQ494W8 412 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 ZNF544Q6NX49 715 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 C6orf120Q7Z4R8 191 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 CLEC4FQ8N1N0 589 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 ZNF433Q8N7K0 673 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 ATP6V1C2Q8NEY4 427 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 ELOA3Q8NG57 546 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 OR8J2Q8NGG1 315 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 OR5D16Q8NGK9 328 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 MIPOL1Q8TD10 442 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 MUS81Q96NY9 551 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 OR5B2Q96R09 309 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 DHRS9Q9BPW9 319 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 REPIN1Q9BWE0 567 aaKnown RBP11.1□□□□□ -0.63
VEGFA-216ENST00000512683 KCNK9Q9NPC2 374 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 YAE1D1Q9NRH1 226 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 CBLN4Q9NTU7 201 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 PNPOQ9NVS9 261 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 PARPBPQ9NWS1 579 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 CDC42EP3Q9UKI2 254 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 PCDHGB4Q9UN71 923 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 TRAPPC4Q9Y296 219 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 B3GALT5Q9Y2C3 310 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 SLC35A3Q9Y2D2 325 aa11.1□□□□□ -0.63
VEGFA-216ENST00000512683 A0A1W2PNR3 127 aa11.09□□□□□ -0.63
VEGFA-216ENST00000512683 SULT2B1O00204 365 aa11.09□□□□□ -0.63
VEGFA-216ENST00000512683 ADAM11O75078 769 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms