RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 TLX2O43763 284 aaPredicted RBP12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 PIP5K1CO60331 668 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 HCN1O60741 890 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 BCAS1O75363 584 aaPredicted RBP12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 PPM1BO75688 479 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 CSTAP01040 98 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 LCKP06239 509 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 TGFBR2P37173 567 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 GPR4P46093 362 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 RFX3P48380 749 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 RAB40BQ12829 278 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 TMED1Q13445 227 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 EBPQ15125 230 aaKnown RBP12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 TIMM50Q3ZCQ8 353 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 NKAIN1Q4KMZ8 207 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 C3orf38Q5JPI3 329 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 HLA-DQA1Q5Y7H0 255 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 WDR88Q6ZMY6 472 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 SLC29A4Q7RTT9 530 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 SLC46A3Q7Z3Q1 461 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 TMPRSS9Q7Z410 1059 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 IQCF1Q8N6M8 205 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 ZNF614Q8N883 585 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 IFI44Q8TCB0 444 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 BPIFA2Q96DR5 249 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 PLEKHA8Q96JA3 519 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 LRR1Q96L50 414 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 CCDC74BQ96LY2 380 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 NUDT9Q9BW91 350 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 OR8D2Q9GZM6 311 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 DSN1Q9H410 356 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 LIN28AQ9H9Z2 209 aaKnown RBP12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 C12orf10Q9HB07 376 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 AMBNQ9NP70 447 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 FGF20Q9NP95 211 aaPredicted RBP12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 FLRT3Q9NZU0 649 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 ATXN7L1Q9ULK2 861 aaPredicted RBP12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 PPIEQ9UNP9 301 aaKnown RBP12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 ERGIC3Q9Y282 383 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 SCN2AQ99250 2005 aa12.04□□□□□ -0.48
DEPDC1B-206ENST00000512452 ARID1BQ8NFD5 2236 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 C2orf92A0A1B0GVN3 265 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 NTN3O00634 580 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 SCDO00767 359 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 SURF4O15260 269 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 ZGLP1P0C6A0 271 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 PNMTP11086 282 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 FGF5P12034 268 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 IFI30P13284 250 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 HPGDP15428 266 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 CD36P16671 472 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 BMP7P18075 431 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 SLC6A8P48029 635 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 SLC9A3P48764 834 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 TMPRSS3P57727 454 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 COPZ1P61923 177 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 DCDP81605 110 aaKnown RBP12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 DAB2P98082 770 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 IL11RAQ14626 422 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 VWA2Q5GFL6 755 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 ALG10BQ5I7T1 473 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 ARMC4Q5T2S8 1044 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 PRAMEF17Q5VTA0 474 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 C1orf189Q5VU69 101 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 OVCH1Q7RTY7 1134 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 SLC34A3Q8N130 599 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 LNX2Q8N448 690 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 PROKR2Q8NFJ6 384 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 OR4C3Q8NH37 302 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 FANK1Q8TC84 345 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 STT3BQ8TCJ2 826 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 TP53INP1Q96A56 240 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 LRFN5Q96NI6 719 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 OR6C1Q96RD1 312 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 GFM1Q96RP9 751 aaKnown RBP12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 DCUN1D5Q9BTE7 237 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 MND1Q9BWT6 205 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 NXF5Q9H1B4 397 aaKnown RBP12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 SLC26A1Q9H2B4 701 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 OR52D1Q9H346 318 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 CPNE5Q9HCH3 593 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 MKL2Q9ULH7 1088 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 ICAM5Q9UMF0 924 aa12.03□□□□□ -0.48
DEPDC1B-206ENST00000512452 A0A087WUJ7 227 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 VSTM2BA6NLU5 285 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 EFCAB9A8MZ26 197 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 M0R082 166 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 CDC42EP2O14613 210 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 MAN1A2O60476 641 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 TSPAN2O60636 221 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 SCRG1O75711 98 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 UTS2O95399 124 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 RAB36O95755 333 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 PTHP01270 115 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 GP1BAP07359 652 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 UBL4AP11441 157 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 MAKP20794 623 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 UGT2B10P36537 528 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 PNLIPRP2P54317 469 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms